RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 RPS19P39019 145 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 HBG1P69891 147 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 HBG2P69892 147 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 SLC9A3R2Q15599 337 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 PAN3Q58A45 887 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 GUSBP11Q6P575 273 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR5M1Q8NGP8 315 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF419Q96HQ0 510 aaPredicted RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A1W2PS29 197 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 SNCAP37840 140 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 FOXF1Q12946 379 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZIC1Q15915 447 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ELP2Q6IA86 826 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 PLXDC2Q6UX71 529 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ASF1BQ9NVP2 202 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 XIRP1Q702N8 1843 aaKnown RBP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 K7EPK0 472 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 RAB5BP61020 215 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 COMMD7Q86VX2 200 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 SIAH3Q8IW03 269 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 FAM71E2Q8N5Q1 922 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 KCNJ16Q9NPI9 418 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 TRIM64BA6NI03 449 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF732B4DXR9 585 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 HRO43593 1189 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 GLAP06280 429 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 PTPN6P29350 595 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 WNT3P56703 355 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 TAS2R30P59541 319 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 PEA15Q15121 130 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 MDGA2Q7Z553 956 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 LGI3Q8N145 548 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR1L3Q8NH93 324 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 SECTM1Q8WVN6 248 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 KCNIP2Q9NS61 270 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 CTSFQ9UBX1 484 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 WNK3Q9BYP7 1800 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 AIPO00170 330 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 DEGS1O15121 323 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 SSX5O60225 188 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 C1QAP02745 245 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 CLEC2LP0C7M8 214 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR8G1Q15617 311 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF573Q86YE8 665 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 RDH10Q8IZV5 341 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 RYDENQ9NUL5 291 aaKnown RBP13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 IL20Q9NYY1 176 aa13.1□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A1B0GX12 115 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF14P17017 642 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 SLC25A1P53007 311 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 SLC22A20A6NK97 555 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 A8MXE2 369 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 TRAPPC2P0DI81 140 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 TRAPPC2BP0DI82 140 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 LIPCP11150 499 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 TBPP20226 339 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR8B8Q15620 311 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 DEFB109BQ30KR1 87 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 PDLIM3Q53GG5 364 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 BORCS7Q96B45 105 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 MED18Q9BUE0 208 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 GPATCH2Q9NW75 528 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 IGHV5-51A0A0C4DH38 117 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF891A8MT65 544 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 NPIPB8E9PQR5 432 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 SIGLEC14Q08ET2 396 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 TFAP2EQ6VUC0 442 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 LSRQ86X29 649 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 DMBX1Q8NFW5 382 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 A4GNTQ9UNA3 340 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 B9D1Q9UPM9 204 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 COL4A1P02462 1669 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 ARPC3O15145 178 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 ABCD3P28288 659 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 GALNSP34059 522 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 KIR2DL1P43626 348 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 RFX2P48378 723 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 SSPNQ14714 243 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF74Q16587 644 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 RHBDD2Q6NTF9 364 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 PLEKHF2Q9H8W4 249 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
PPARGC1B-203ENST00000394320 F8W036 122 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms