RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DRAM2Q6UX65 266 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 TMPPEQ6ZT21 453 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 EXD3Q8N9H8 876 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 OR9A1PQ8NGU1 263 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 METTL21AQ8WXB1 218 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 TOMM40LQ969M1 308 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 LHX6Q9UPM6 363 aa6.96□□□□□ -1.29
VTI1A-201ENST00000393077 SHISA3A0PJX4 238 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 H7C417 338 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 RNASET2O00584 256 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 FCMRO60667 390 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 PGA4P0DJD7 388 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 PGA5P0DJD9 388 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 IMPA1P29218 277 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 CTGFP29279 349 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SERPINA4P29622 427 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 GZMMP51124 257 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 HMGA2P52926 109 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 PNLIPRP3Q17RR3 467 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 MS4A13Q5J8X5 152 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 GTF2H5Q6ZYL4 71 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM173Q86WV6 379 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 HIST3H2BBQ8N257 126 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM99Q8N816 258 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 Q8NFD4 153 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OR51L1Q8NGJ5 315 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OR13D1Q8NGV5 346 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SH3RF2Q8TEC5 729 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 IL22RA2Q969J5 263 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 MCHR1Q99705 422 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SMG9Q9H0W8 520 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 CACFD1Q9UGQ2 172 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 FCF1Q9Y324 198 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ETV7Q9Y603 341 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 COLEC10Q9Y6Z7 277 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 A0A1B0GVT2 93 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 KCNAB3O43448 404 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 GJB5O95377 273 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 KLK1P06870 262 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ASGR2P07307 311 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF20P17024 532 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 APLNRP35414 380 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TFPI2P48307 235 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 DNASE1L1P49184 302 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TNFSF10P50591 281 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SIRPAP78324 504 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SCGB2A2Q13296 93 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ARFRP1Q13795 201 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OPN5Q6U736 354 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ERN2Q76MJ5 926 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 CAMKMTQ7Z624 323 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 RBM45Q8IUH3 476 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 C7orf61Q8IZ16 206 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 RNF175Q8N4F7 328 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 AMER3Q8N944 861 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OR4A4PQ8NGN8 299 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OR1N1Q8NGS0 311 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF461Q8TAF7 563 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF514Q96K75 400 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 RNF2Q99496 336 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 FAM117AQ9C073 453 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 OR8D2Q9GZM6 311 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 P2RY12Q9H244 342 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 PRODH2Q9UF12 536 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
VTI1A-201ENST00000393077 ZNF337Q9Y3M9 751 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 QSER1Q2KHR3 1735 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SHROOM3Q8TF72 1996 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 SPAG17Q6Q759 2223 aa6.96□□□□□ -1.3
VTI1A-201ENST00000393077 TRAV1-2A0A0B4J238 106 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 A0A1B0GV72 72 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3BA6NDS4 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 GPRIN2O60269 458 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BKO60814 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BJP06899 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3HP0C7X1 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR12D1P0DN82 309 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BOP23527 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BBP33778 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BDP58876 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 RAB11AP62491 216 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST1H2BCP62807 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TGM3Q08188 693 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST2H2BEQ16778 126 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 C2orf68Q2NKX9 166 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 LYPLAL1Q5VWZ2 237 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TBC1D3GQ6DHY5 549 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TCTN3Q6NUS6 607 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 NUP54Q7Z3B4 507 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 KREMEN2Q8NCW0 462 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 TMEM104Q8NE00 496 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
VTI1A-201ENST00000393077 OR51A7Q8NH64 312 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms