RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 B3GAT2Q9NPZ5 323 aa18.93■□□□□ 0.62
SPHK1-202ENST00000392496 POLE4Q9NR33 117 aa18.93■□□□□ 0.62
SPHK1-202ENST00000392496 ABRACLQ9P1F3 81 aa18.93■□□□□ 0.62
SPHK1-202ENST00000392496 RCE1Q9Y256 329 aa18.93■□□□□ 0.62
SPHK1-202ENST00000392496 AK6Q9Y3D8 172 aaKnown RBP18.93■□□□□ 0.62
SPHK1-202ENST00000392496 ZNF716A6NP11 495 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 PRKAR1AP10644 381 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 RFC3P40938 356 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 SRSF6Q13247 344 aaKnown RBP18.92■□□□□ 0.62
SPHK1-202ENST00000392496 FOXL2NBQ6ZUU3 175 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 RHOUQ7L0Q8 258 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 SYT9Q86SS6 491 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.92■□□□□ 0.62
SPHK1-202ENST00000392496 GDPD1Q8N9F7 314 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 OR2AJ1Q8NGZ0 328 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 CENPMQ9NSP4 180 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 FOXD3Q9UJU5 478 aaPredicted RBP18.92■□□□□ 0.62
SPHK1-202ENST00000392496 GDF2Q9UK05 429 aaPredicted RBP18.92■□□□□ 0.62
SPHK1-202ENST00000392496 SLC22A13Q9Y226 551 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 FLVCR1Q9Y5Y0 555 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 LHFPL6Q9Y693 200 aa18.92■□□□□ 0.62
SPHK1-202ENST00000392496 CDAP32320 146 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 MAGEA5P43359 124 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 SOX2P48431 317 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 LHX2P50458 406 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 LRRC28Q86X40 367 aaPredicted RBP18.91■□□□□ 0.62
SPHK1-202ENST00000392496 RDH10Q8IZV5 341 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 SCMH1Q96GD3 660 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 TCF7L1Q9HCS4 588 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 FAIMQ9NVQ4 179 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 FBXL3Q9UKT7 428 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 GTF2A1LQ9UNN4 478 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 POLR1DQ9Y2S0 133 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 CACNA1CQ13936 2221 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 CNTRLQ7Z7A1 2325 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 hCG_2014768A0A024R1R8 64 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 FAM166BA8MTA8 275 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 SLC2A2P11168 524 aaPredicted RBP18.91■□□□□ 0.62
SPHK1-202ENST00000392496 ATF1P18846 271 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 SELENOPP49908 381 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 LSM6P62312 80 aaKnown RBP18.91■□□□□ 0.62
SPHK1-202ENST00000392496 ARG2P78540 354 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 CAMK2BQ13554 666 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 PHYHD1Q5SRE7 291 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 C20orf196Q8IYI0 205 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 OR8H2Q8N162 312 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 ZFP62Q8NB50 900 aaPredicted RBP18.91■□□□□ 0.62
SPHK1-202ENST00000392496 OR10AC1Q8NH08 325 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 ROBO4Q8WZ75 1007 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 ORAI1Q96D31 301 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 SCNM1Q9BWG6 230 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.91■□□□□ 0.62
SPHK1-202ENST00000392496 EMC9Q9Y3B6 208 aa18.91■□□□□ 0.62
SPHK1-202ENST00000392496 MAGEB3O15480 346 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 DHHO43323 396 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 CYTIPO60759 359 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 CELA3AP09093 270 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 ELK1P19419 428 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 GUCA1AP43080 201 aaPredicted RBP18.9■□□□□ 0.62
SPHK1-202ENST00000392496 MMP16P51512 607 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 DEFA1P59665 94 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 DEFA3P59666 94 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 RIN1Q13671 783 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 ODF4Q2M2E3 257 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 STAC2Q6ZMT1 411 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 SLC22A16Q86VW1 577 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 OR10S1Q8NGN2 331 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 TRMT10AQ8TBZ6 339 aaKnown RBP18.9■□□□□ 0.62
SPHK1-202ENST00000392496 TMEM106AQ96A25 262 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 GFI1Q99684 422 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 SMAD5Q99717 465 aaKnown RBP18.9■□□□□ 0.62
SPHK1-202ENST00000392496 SLC25A18Q9H1K4 315 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 PPP1R3EQ9H7J1 279 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 SP140LQ9H930 580 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 G6PC2Q9NQR9 355 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 OR52A1Q9UKL2 312 aa18.9■□□□□ 0.62
SPHK1-202ENST00000392496 TMEM269A0A1B0GVZ9 245 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 FAM25AB3EWG3 89 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 FAM25CB3EWG5 89 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 FAM25GB3EWG6 89 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 WT1P19544 449 aaPredicted RBP18.89■□□□□ 0.61
SPHK1-202ENST00000392496 KLHL24Q6TFL4 600 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 FCRLAQ7L513 359 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 POC5Q8NA72 575 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 TMEM178AQ8NBL3 297 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 OR51A4Q8NGJ6 313 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 TSEN15Q8WW01 171 aaKnown RBP18.89■□□□□ 0.61
SPHK1-202ENST00000392496 NELFAQ9H3P2 528 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 CYSLTR2Q9NS75 346 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 TBCCD1Q9NVR7 557 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 C14orf119Q9NWQ9 140 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 SPTBN2O15020 2390 aa18.89■□□□□ 0.61
SPHK1-202ENST00000392496 ZNF878C9JN71 531 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 SLC43A1O75387 559 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 ISG15P05161 165 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 ZNF708P17019 499 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 NPR2P20594 1047 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 MSR1P21757 451 aa18.88■□□□□ 0.61
SPHK1-202ENST00000392496 AZGP1P25311 298 aaKnown RBP18.88■□□□□ 0.61
SPHK1-202ENST00000392496 CLDN18P56856 261 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms