RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TUBG2Q9NRH3 451 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 REV1Q9UBZ9 1251 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 CGGBP1Q9UFW8 167 aaPredicted RBP10.89□□□□□ -0.67
GGPS1-203ENST00000391855 KCNG2Q9UJ96 466 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 B9D1Q9UPM9 204 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 U3KQV3 271 aa10.89□□□□□ -0.67
GGPS1-203ENST00000391855 IGLV1-36A0A0B4J1U3 117 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 TCRBV3S1A0A5B6 114 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 J3QW42 95 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 BHLHE40O14503 412 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 GSC2O15499 205 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 TP53P04637 393 aaPredicted RBP10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ADRA2AP08913 450 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 GAAP10253 952 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 GCH1P30793 250 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 HTR5AP47898 357 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.88□□□□□ -0.67
GGPS1-203ENST00000391855 NKPD1Q17RQ9 610 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 MSMPQ1L6U9 139 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ZNF718Q3SXZ3 478 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 CLEC12AQ5QGZ9 265 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ZNF774Q6NX45 483 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 UGT2A3Q6UWM9 527 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ZBTB46Q86UZ6 589 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 NPEPL1Q8NDH3 523 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 OR2T33Q8NG76 320 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 GIPC3Q8TF64 312 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 COG8Q96MW5 612 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
GGPS1-203ENST00000391855 SMR3AQ99954 134 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 HDHD2Q9H0R4 259 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 TBCCD1Q9NVR7 557 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ASH2LQ9UBL3 628 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 DUSP13Q9UII6 198 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 KLHL21Q9UJP4 597 aa10.88□□□□□ -0.67
GGPS1-203ENST00000391855 ACANP16112 2415 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 LOC100509620A0A075B734 347 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 FKBP6O75344 327 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 E2F6O75461 281 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 IFNGP01579 166 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 SCG5P05408 212 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 DAOP14920 347 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 CENPAP49450 140 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 PPP1R8Q12972 351 aaKnown RBP10.87□□□□□ -0.67
GGPS1-203ENST00000391855 PCGF3Q3KNV8 242 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 VASH1Q7L8A9 365 aaPredicted RBP10.87□□□□□ -0.67
GGPS1-203ENST00000391855 OR6V1Q8N148 313 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 LNX2Q8N448 690 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 PAPD5Q8NDF8 572 aaKnown RBP10.87□□□□□ -0.67
GGPS1-203ENST00000391855 ICA1LQ8NDH6 482 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 GJC3Q8NFK1 279 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 SLC26A10Q8NG04 563 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 OR52E2Q8NGJ4 325 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 OR2T4Q8NH00 348 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 TEX47Q8TBZ9 253 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 C4orf45Q96LM5 186 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 TSSK6Q9BXA6 273 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 CADM1Q9BY67 442 aaKnown RBP10.87□□□□□ -0.67
GGPS1-203ENST00000391855 OR51B6Q9H340 312 aa10.87□□□□□ -0.67
GGPS1-203ENST00000391855 RPRD1BQ9NQG5 326 aaKnown RBP10.87□□□□□ -0.67
GGPS1-203ENST00000391855 ZNF469Q96JG9 3925 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 A0A096LNT2 108 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 OR6C6A6NF89 314 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 DCTN6O00399 190 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ABHD16AO95870 558 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 IGHV3-13P01766 116 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 IGFBP1P08833 259 aaPredicted RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 LIPAP38571 399 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 WNT5AP41221 380 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ALDH3B1P43353 468 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 RGS6P49758 472 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 PPP1CBP62140 327 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 CBX1P83916 185 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ZMAT1Q5H9K5 638 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 FAM209AQ5JX71 171 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 MBNL2Q5VZF2 373 aaKnown RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 RFPL4BQ6ZWI9 263 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 LRP11Q86VZ4 500 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ZNF101Q8IZC7 436 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ZNF786Q8N393 782 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 OR8D4Q8NGM9 314 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 UBASH3BQ8TF42 649 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 DNAJC9Q8WXX5 260 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 MARS2Q96GW9 593 aaKnown RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 TSSK2Q96PF2 358 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 COQ7Q99807 217 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 PLA2G12AQ9BZM1 189 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 SRA1Q9HD15 236 aaKnown RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 HINT3Q9NQE9 182 aaKnown RBP10.86□□□□□ -0.67
GGPS1-203ENST00000391855 CYSLTR2Q9NS75 346 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 NKIRAS2Q9NYR9 191 aa10.86□□□□□ -0.67
GGPS1-203ENST00000391855 TAAR3PQ9P1P4 343 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms