RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RBMX2Q9Y388 322 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PPIL1Q9Y3C6 166 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 FADS3Q9Y5Q0 445 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAH17Q9UFH2 4485 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TNIKQ9UKE5 1360 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 INTS1Q8N201 2190 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GRIN2BQ13224 1484 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 RIF1Q5UIP0 2472 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PKD1L2Q7Z442 2459 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ASCC3Q8N3C0 2202 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LAMA3Q16787 3333 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PFASO15067 1338 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SPTA1P02549 2419 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LAMA1P25391 3075 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MGAM2Q2M2H8 2515 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 WDR62O43379 1518 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DNAH5Q8TE73 4624 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DOCK6Q96HP0 2047 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC100509620A0A075B734 347 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR75-ASB3A0A0A6YYF3 556 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAV1-1A0A0B4J248 108 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0B4J2A0 478 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HSFX4A0A1B0GTS1 333 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HSFX3A0A1B0GWH4 333 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A1W2PQ09 198 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAPPC13A5PLN9 417 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR6C74A6NCV1 312 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GOLGA6CA6NDK9 693 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GOLGA6BA6NDN3 693 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ANKDD1BA6NHY2 528 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KRBOX1C9JBD0 128 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 E7ESA3 106 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 F5H423 210 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KLRC4-KLRK1H3BQV0 150 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 M0QXV9 152 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 M0R2N4 97 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HIP1O00291 1037 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CHEK1O14757 476 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CASC3O15234 703 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GYG2O15488 501 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TTI1O43156 1089 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MGRN1O60291 552 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DOK2O60496 412 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NMT2O60551 498 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TOM1O60784 492 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NOS1APO75052 506 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SCO1O75880 301 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RAB3DO95716 219 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MYL1P05976 194 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KLK3P07288 261 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HSP90AB1P08238 724 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR5AC1P0C628 307 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ANKRD34CP0C6C1 535 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SPP1P10451 314 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CLUP10909 449 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 BCKDHAP12694 445 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MMP11P24347 488 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 AZGP1P25311 298 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 AK4P27144 223 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ANXA13P27216 316 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CALRP27797 417 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CRABP2P29373 138 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CCND3P30281 292 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MAT2AP31153 395 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PRDX2P32119 198 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RFC4P35249 363 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ACTN2P35609 894 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 NNMTP40261 264 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR6P46095 362 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 HCAR3P49019 387 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RGS7P49802 495 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 RAB27AP51159 221 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 IDH3GP51553 393 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CCR8P51685 355 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MFAP4P55083 255 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 KCNK10P57789 538 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 OR4D2P58180 307 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 VAMP2P63027 116 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DEFA5Q01523 94 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 COX6A2Q02221 97 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MCL1Q07820 350 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC38A11Q08AI6 406 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 AQP6Q13520 282 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MXD4Q14582 209 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CRYMQ14894 314 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MED22Q15528 200 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TRADDQ15628 312 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MAPRE1Q15691 268 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 UBE2V2Q15819 145 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 BAK1Q16611 211 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 C4orf26Q17RF5 130 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 LRRC26Q2I0M4 334 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GFOD2Q3B7J2 385 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PARP15Q460N3 678 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC36A2Q495M3 483 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM155Q4W5P6 130 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ALFQ53S48 1182 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 TCEAL5Q5H9L2 206 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 PHYHD1Q5SRE7 291 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms