RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SYNPRQ8TBG9 265 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TSACCQ96A04 125 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMIGD2Q96BF3 282 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 KCND3Q9UK17 655 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TBX21Q9UL17 535 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MCTS1Q9ULC4 181 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PSAT1Q9Y617 370 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TSPAN11A1L157 253 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MYADML2A6NDP7 307 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MSX1P28360 303 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ACVRL1P37023 503 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 HAAOP46952 286 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TCL1AP56279 114 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CLRN1P58418 232 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SLC9A3R2Q15599 337 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SYT14P1Q58G82 188 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 RTP2Q5QGT7 225 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 DEGS2Q6QHC5 323 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CDHR3Q6ZTQ4 885 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMPRSS12Q86WS5 348 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LILRB2Q8N423 598 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 FBXO27Q8NI29 283 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF75AQ96N20 296 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 GPR78Q96P69 363 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 WDR77Q9BQA1 342 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BEX1Q9HBH7 125 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF840PA6NDX5 716 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF814B7Z6K7 855 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CA11O75493 328 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TNFSF15O95150 251 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SCGB1D1O95968 90 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SOD1P00441 154 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 FPR2P25090 351 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TAS2R60P59551 318 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 EXT1Q16394 746 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BATFQ16520 125 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 RCBTB1Q8NDN9 531 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 OR1S2Q8NGQ3 325 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 AKR7LQ8NHP1 331 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SPTSSAQ969W0 71 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PIK3IP1Q96FE7 263 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SLC22A14Q9Y267 594 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TK1P04183 234 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CYC1P08574 325 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SCGB1A1P11684 91 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CBR1P16152 277 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BMI1P35226 326 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 VASPP50552 380 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LYPD4Q6UWN0 246 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CA5BP1Q8WTZ4 195 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 R3HDM4Q96D70 268 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ADAD1Q96M93 576 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 NSUN5Q96P11 429 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 DPH7Q9BTV6 452 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ULBP3Q9BZM4 244 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ARV1Q9H2C2 271 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF860A6NHJ4 632 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CLDN34H7C241 214 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 CD8AP01732 235 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 IGHA1P01876 353 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MAN2A2P49641 1150 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LTBQ06643 244 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PODNL1Q6PEZ8 512 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MAML2Q8IZL2 1156 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 EXD3Q8N9H8 876 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 BSCL2Q96G97 398 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TRMT2BQ96GJ1 504 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 HRH4Q9H3N8 390 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 Q9N2K0 584 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM9BQ9NQ34 198 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 FBXL2Q9UKC9 423 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LOC102725191A0A1B0GVB3 256 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 RPS10-NUDT3A0A1W2PQS6 291 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 HSD17B6O14756 317 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 NDUFA2O43678 99 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SFTA3P0C7M3 94 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ABCD3P28288 659 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 GCH1P30793 250 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LIPAP38571 399 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PBX2P40425 430 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 RPS10P46783 165 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SLC35A1P78382 337 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 DEFB103AP81534 67 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 NSDHLQ15738 373 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PSAPL1Q6NUJ1 521 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 LEG1Q6P5S2 330 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TMEM81Q6P7N7 255 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 OR52J3Q8NH60 311 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MMP28Q9H239 520 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 DSPPQ9NZW4 1301 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 ATG2BQ96BY7 2078 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 PPP6CO00743 305 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 GLSO94925 669 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 C6P13671 934 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 SERPINA2P20848 420 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
PTPRD-203ENST00000381196 TGFBR3Q03167 851 aa4.48□□□□□ -1.69
PTPRD-203ENST00000381196 THEM4Q5T1C6 240 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms