RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CDC20BQ86Y33 519 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 PPP1R1CQ8WVI7 109 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 ELF4Q99607 663 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 CDCA3Q99618 268 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 MAP3K3Q99759 626 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 OR2AT4A6NND4 320 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 AKR7A3O95154 331 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 AMY2AP04746 511 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 ASAH2BP0C7U1 165 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 SPP1P10451 314 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 KCNJ3P48549 501 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 DHRS2Q13268 280 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 HYAL4Q2M3T9 481 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 MESTQ5EB52 335 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 TMEM205Q6UW68 189 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 UNQ6126/PRO20091Q6UXV3 157 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 ZNF440Q8IYI8 595 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 ZNF321PQ8N8H1 164 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 OR2G2Q8NGZ5 317 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 GPX8Q8TED1 209 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 GLYATL2Q8WU03 294 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 PTDSS2Q9BVG9 487 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 MKL2Q9ULH7 1088 aa14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 RPH3AQ9Y2J0 694 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-201ENST00000378133 TRBV5-7A0A0A0MS05 114 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 OR4C45A6NMZ5 311 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 CDC40O60508 579 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 GABRG2P18507 467 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 ATP1B3P54709 279 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 NR0B2Q15466 257 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 SWI5Q1ZZU3 235 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 H3F3CQ6NXT2 135 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 OR1J4Q8NGS1 313 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 GPR148Q8TDV2 347 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 FAM3DQ96BQ1 224 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 UBQLN4Q9NRR5 601 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 TRIOO75962 3097 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 FADS1O60427 444 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 F12P00748 615 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 CLPSP04118 112 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 IGHV4-34P06331 123 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 ITGA5P08648 1049 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 APEHP13798 732 aaKnown RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 DCDP81605 110 aaKnown RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 SSBP1Q04837 148 aaKnown RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 SKP2Q13309 424 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 VWA2Q5GFL6 755 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 ATPAF1Q5TC12 328 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 LPCAT3Q6P1A2 487 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 GTPBP8Q8N3Z3 284 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 TSPAN32Q96QS1 320 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 TLNRD1Q9H1K6 362 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 SYT4Q9H2B2 425 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 EPHA6Q9UF33 1036 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 PLEKHA6Q9Y2H5 1048 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 COL4A2P08572 1712 aa14.95□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF432O94892 652 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 CRYBA1P05813 215 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 FABP1P07148 127 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ALOX5APP20292 161 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 CASRP41180 1078 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 CAPZA1P52907 286 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SRSF4Q08170 494 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 FNDC7Q5VTL7 733 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 POMZP3Q6PJE2 187 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 LRRC69Q6ZNQ3 347 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PGAP1Q75T13 922 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 TDHQ8IZJ6 230 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZFP82Q8N141 532 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 GALNT16Q8N428 558 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 INO80EQ8NBZ0 244 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF563Q8TA94 476 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PAQR8Q8TEZ7 354 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SFT2D1Q8WV19 159 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 LIPHQ8WWY8 451 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZBTB8AQ96BR9 441 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PIAS3Q9Y6X2 628 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SPTY2D1-AS1A0A0U1RR47 76 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 C17orf105B2RV13 164 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PRAMEF26H0Y7S4 382 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SCDO00767 359 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 HLA-AP01891 365 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 THEGLP0DJG4 465 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SKP1P63208 163 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 DLX2Q07687 328 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 FZD2Q14332 565 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SCGB2B2Q4G0G5 96 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 PRSS35Q8N3Z0 413 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 TMEM229BQ8NBD8 167 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 TAAR8Q969N4 342 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 SEH1LQ96EE3 360 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 FOXN4Q96NZ1 517 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 AMELYQ99218 206 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 GAL3ST1Q99999 423 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 FARSAQ9Y285 508 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 OR6C76A6NM76 312 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ZNF264O43296 627 aa14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-201ENST00000378133 ACTL6AO96019 429 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms