RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF768Q9H5H4 540 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PRSS37A4D1T9 235 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 H3BML4 177 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF217O75362 1048 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 CTAG2O75638 210 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FCGR2AP12318 317 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 MELKQ14680 651 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SLC36A2Q495M3 483 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 EXOSC6Q5RKV6 272 aaKnown RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 NAA40Q86UY6 237 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ANGPTL5Q86XS5 388 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 LGI3Q8N145 548 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PHOSPHO2Q8TCD6 241 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 GCDHQ92947 438 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 ELF4Q99607 663 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-202ENST00000377865 LPAR4Q99677 370 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 SLC6A17Q9H1V8 727 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 FLVCR1Q9Y5Y0 555 aa7.98□□□□□ -1.13
PCDH9-202ENST00000377865 PSME4Q14997 1843 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 FTCDNL1E5RQL4 147 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 F5H5K5 113 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 APEHP13798 732 aaKnown RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF250P15622 560 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 AKR1C2P52895 323 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 MAT1AQ00266 395 aaKnown RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 RUNX2Q13950 521 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF542PQ5EBM4 170 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 FAHD2BQ6P2I3 314 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ST7LQ8TDW4 575 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF296Q8WUU4 475 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 FAHD2AQ96GK7 314 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF304Q9HCX3 659 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 CA5BQ9Y2D0 317 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 COA3Q9Y2R0 106 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 NKX2-2O95096 273 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SYNGR4O95473 234 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 DUSP1P28562 367 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR1D4P47884 311 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 VWA2Q5GFL6 755 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 KIRREL2Q6UWL6 708 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 PLPP5Q8NEB5 264 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR52N5Q8NH56 324 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR14L1PQ8NHC6 308 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 NIPSNAP3BQ9BS92 247 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 C20orf141Q9NUB4 165 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SLCO1C1Q9NYB5 712 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 POMT1Q9Y6A1 747 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 TMEM272A0A1B0GTI8 110 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 FITM1A5D6W6 292 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR6C76A6NM76 312 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 CD300LBA8K4G0 201 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 PRAMEF4O60810 478 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 GCM2O75603 506 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 WNT11O96014 354 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 GABREP78334 506 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 KIAA0141Q14154 515 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ERV3-1Q14264 604 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 COMTD1Q86VU5 262 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 THAP3Q8WTV1 239 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 MRGPRX3Q96LB0 322 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR8B4Q96RC9 309 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 TCEAL2Q9H3H9 227 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 LDAHQ9H6V9 325 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 RHOFQ9HBH0 211 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 VDAC3Q9Y277 283 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 HS3ST3A1Q9Y663 406 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 LOC285556D6RIA3 1793 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 TMEM235A6NFC5 223 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SULT2B1O00204 365 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SLC33A1O00400 549 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SERPINE2P07093 398 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 HOXB9P17482 250 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 C17orf67Q0P5P2 114 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 RBM39Q14498 530 aaKnown RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZNF74Q16587 644 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 NPSR1Q6W5P4 371 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 Q6ZRG5 221 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 H1FNTQ75WM6 255 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ARHGEF39Q8N4T4 335 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 OR13C8Q8NGS7 320 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 CPNE4Q96A23 557 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-202ENST00000377865 CCDC74AQ96AQ1 378 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 TXNIPQ9H3M7 391 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ZCCHC4Q9H5U6 513 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 SLC17A4Q9Y2C5 497 aa7.97□□□□□ -1.13
PCDH9-202ENST00000377865 ANK1P16157 1881 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 PPP1R2P9O14990 202 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 OR2C1O95371 312 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 LCATP04180 440 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 CALCRP30988 508 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 HRH1P35367 487 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 TAGLN2P37802 199 aaKnown RBP7.96□□□□□ -1.13
PCDH9-202ENST00000377865 NDUFA6P56556 154 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 GUCA2AQ02747 115 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 TMEM71Q6P5X7 295 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 BEND4Q6ZU67 534 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 LINC00346Q8IVM7 164 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 OTOSQ8NHW6 89 aa7.96□□□□□ -1.13
PCDH9-202ENST00000377865 RNF170Q96K19 258 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms