RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DEGS2Q6QHC5 323 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 OR2Y1Q8NGV0 311 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 C11orf40Q8WZ69 217 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 SLC25A44Q96H78 314 aaPredicted RBP18.04■□□□□ 0.48
VSX1-202ENST00000376709 OR2M2Q96R28 347 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 MRPL13Q9BYD1 178 aaKnown RBP18.04■□□□□ 0.48
VSX1-202ENST00000376709 ACTR6Q9GZN1 396 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 C20orf85Q9H1P6 137 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 OR51J1Q9H342 316 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 NKIRAS2Q9NYR9 191 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 TAS2R4Q9NYW5 299 aa18.04■□□□□ 0.48
VSX1-202ENST00000376709 LOC107986453A0A1B0GWG9 222 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 A0A1W2PPL8 197 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 NAP1L6A6NFF2 107 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 SLC17A2O00624 439 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 XRCC3O43542 346 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 GMDSO60547 372 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 GLSO94925 669 aaPredicted RBP18.03■□□□□ 0.48
VSX1-202ENST00000376709 IGHG1P01857 330 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 ADH6P28332 368 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 DNASE1L1P49184 302 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 RAG2P55895 527 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 LIX1LQ8IVB5 337 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 RNF133Q8WVZ7 376 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 GIMAP1Q8WWP7 306 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 FAM3DQ96BQ1 224 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 ZBTB8AQ96BR9 441 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 NIPAL2Q9H841 368 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 G6PC2Q9NQR9 355 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 GSG1Q2KHT4 349 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 GLT8D1Q68CQ7 371 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 ANKRD16Q6P6B7 361 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 ZNF704Q6ZNC4 412 aaPredicted RBP18.03■□□□□ 0.48
VSX1-202ENST00000376709 PLCZ1Q86YW0 608 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 NOXO1Q8NFA2 376 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 ZFAND1Q8TCF1 268 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 STMN3Q9NZ72 180 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 KLHL13Q9P2N7 655 aa18.03■□□□□ 0.48
VSX1-202ENST00000376709 MED12Q93074 2177 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 ISG15P05161 165 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 ACHEP22303 614 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 LAP3P28838 519 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 FOLR3P41439 243 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 SSR4P51571 173 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 P2RY4P51582 365 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 EFNB2P52799 333 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 C2orf76Q3KRA6 126 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 TMEM255AQ5JRV8 349 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 OR1J4Q8NGS1 313 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 M1APQ8TC57 530 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 RHBDD1Q8TEB9 315 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 SLAMF6Q96DU3 332 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 NKX3-1Q99801 234 aaPredicted RBP18.02■□□□□ 0.48
VSX1-202ENST00000376709 SEC61A2Q9H9S3 476 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 DIABLOQ9NR28 239 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 HDGFL3Q9Y3E1 203 aa18.02■□□□□ 0.48
VSX1-202ENST00000376709 NSG1A0A0A6YYJ2 146 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 LOC100289279A0A1B0GTE1 492 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ANKRD20A5PA0PJZ0 165 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 TTLL8A6PVC2 850 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 SULT2B1O00204 365 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 CTAG2O75638 210 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 TPPPO94811 219 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 PGA4P0DJD7 388 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 PGA3P0DJD8 388 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ZNF43P17038 809 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 FSTP19883 344 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 FKBP2P26885 142 aaKnown RBP18.01■□□□□ 0.47
VSX1-202ENST00000376709 CARD17Q5XLA6 110 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 NHLRC1Q6VVB1 395 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 HDDC2Q7Z4H3 204 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 OR11G2Q8NGC1 345 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 KCNK15Q9H427 330 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 CDCP1Q9H5V8 836 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 SLA2Q9H6Q3 261 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ZNF275Q9NSD4 429 aaPredicted RBP18.01■□□□□ 0.47
VSX1-202ENST00000376709 CYB5R1Q9UHQ9 305 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ZNF222Q9UK12 451 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 POLR1DQ9Y2S0 133 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 GGT3PA6NGU5 568 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ZNF814B7Z6K7 855 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 TRAF3IP2O43734 574 aaPredicted RBP18.01■□□□□ 0.47
VSX1-202ENST00000376709 UBCP0CG48 685 aaKnown RBP18.01■□□□□ 0.47
VSX1-202ENST00000376709 PSMB1P20618 241 aaKnown RBP18.01■□□□□ 0.47
VSX1-202ENST00000376709 ACP1P24666 158 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 TMEM244Q5VVB8 128 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 CD276Q5ZPR3 534 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 KLHL24Q6TFL4 600 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 TMEM156Q8N614 296 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 OR11H7Q8NGC8 314 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 OXGR1Q96P68 337 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 C1orf198Q9H425 327 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 BEX1Q9HBH7 125 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 ZNF160Q9HCG1 818 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 PISDQ9UG56 409 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 GPR179Q6PRD1 2367 aa18.01■□□□□ 0.47
VSX1-202ENST00000376709 PEX14O75381 377 aa18■□□□□ 0.47
VSX1-202ENST00000376709 GP1BAP07359 652 aa18■□□□□ 0.47
VSX1-202ENST00000376709 CCL3P10147 92 aa18■□□□□ 0.47
VSX1-202ENST00000376709 IGFBP3P17936 291 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms