RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 GAREM1Q9H706 876 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 CYB5R1Q9UHQ9 305 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 IGHV3-20A0A0C4DH32 117 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 LOC100289279A0A1B0GTE1 492 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 RHPN2P1A8MT19 583 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 ARPC1BO15143 372 aaKnown RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 SOX2P48431 317 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 POU3F4P49335 361 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 CCR4P51679 360 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 UNC119Q13432 240 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 C2orf76Q3KRA6 126 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 MOGAT2Q3SYC2 334 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 C1orf189Q5VU69 101 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 METTL11BQ5VVY1 283 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 SFRP4Q6FHJ7 346 aaPredicted RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 RABEPKQ7Z6M1 372 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 RTN4RL2Q86UN3 420 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 TMPRSS12Q86WS5 348 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF563Q8TA94 476 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 AQP3Q92482 292 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 S100A16Q96FQ6 103 aaKnown RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 CYYR1Q96J86 154 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 DMRTA2Q96SC8 542 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 NKX3-1Q99801 234 aaPredicted RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 TAS2R10Q9NYW0 307 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 FBLN5Q9UBX5 448 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 MKL2Q9ULH7 1088 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 C11orf98E9PRG8 122 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SLC16A7O60669 478 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 MAS1P04201 325 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 GIPP09681 153 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 GP1BBP13224 206 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 CXCR1P25024 350 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 CALCRP30988 508 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF133P52736 654 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 OR7E24Q6IFN5 339 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM81Q6P7N7 255 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SEH1LQ96EE3 360 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 DNAJA3Q96EY1 480 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 FN3KRPQ9HA64 309 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 NOX3Q9HBY0 568 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 PROK2Q9HC23 129 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 FGF21Q9NSA1 209 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TAS2R4Q9NYW5 299 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 KLK13Q9UKR3 277 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 A0A1B0GTI1 187 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TRIM77I1YAP6 450 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 PGA4P0DJD7 388 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 PGA3P0DJD8 388 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 AFF3P51826 1226 aaKnown RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 FOXF1Q12946 379 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 EXOSC2Q13868 293 aaKnown RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 NR0B2Q15466 257 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 RNF144BQ7Z419 303 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF227Q86WZ6 799 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SPEM1Q8N4L4 309 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 OR51D1Q8NGF3 324 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 OR52B4Q8NGK2 314 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 STT3BQ8TCJ2 826 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 PNPLA2Q96AD5 504 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SMAD5Q99717 465 aaKnown RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 METTL17Q9H7H0 456 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TCF7L1Q9HCS4 588 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 COA3Q9Y2R0 106 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 CCL1P22362 96 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 INPP1P49441 399 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 CLLU1Q5K131 121 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SLC18B1Q6NT16 456 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM71Q6P5X7 295 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 FOXL2NBQ6ZUU3 175 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 NDUFAF7Q7L592 441 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF671Q8TAW3 534 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 FAM3DQ96BQ1 224 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF775Q96BV0 537 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-202ENST00000376659 SDK1Q7Z5N4 2213 aa8.55□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM265A0A087WTH1 108 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 TRAV14DV4A0A0A6YYC5 116 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 IGHV5-10-1A0A0J9YXX1 117 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 OR14I1A6ND48 311 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 GMFGO60234 142 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 APOBEC1P41238 236 aaKnown RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 MMP16P51512 607 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ANGPT1Q15389 498 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 KCNMB1Q16558 191 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ARHGAP40Q5TG30 622 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 DCAF12L2Q5VW00 463 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 SLC29A4Q7RTT9 530 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF433Q8N7K0 673 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-202ENST00000376659 DUSP19Q8WTR2 217 aa8.54□□□□□ -1.04
TRIM39-202ENST00000376659 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms