RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CXCL3P19876 107 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 CASRP41180 1078 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 RBM34P42696 430 aaKnown RBP10.02□□□□□ -0.8
HDAC6-203ENST00000376619 ZNF84P51523 738 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 TAS2R20P59543 309 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 DCAF7P61962 342 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 GRK1Q15835 563 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 ABCA11PQ4W5N1 156 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 KCTD20Q7Z5Y7 419 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 ZNF100Q8IYN0 542 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 OR7G1Q8NGA0 311 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 APOBEC4Q8WW27 367 aaKnown RBP10.02□□□□□ -0.8
HDAC6-203ENST00000376619 HYLS1Q96M11 299 aa10.02□□□□□ -0.8
HDAC6-203ENST00000376619 MRM2Q9UI43 246 aaKnown RBP10.02□□□□□ -0.8
HDAC6-203ENST00000376619 DSPPQ9NZW4 1301 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 NXPH3O95157 252 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 LDOC1O95751 146 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 CCL2P13500 99 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 POU3F2P20265 443 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 CFL1P23528 166 aaKnown RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 RBMS1P29558 406 aaKnown RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 NPY4RP50391 375 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 DUSP3P51452 185 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 NDUFA5Q16718 116 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 CHRFAM7AQ494W8 412 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 TRILQ7L0X0 811 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 INO80EQ8NBZ0 244 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 FBLIM1Q8WUP2 373 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 SLAMF6Q96DU3 332 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 CPNE2Q96FN4 548 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 PARP12Q9H0J9 701 aaKnown RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 FRRS1LQ9P0K9 344 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 A3GALT2U3KPV4 340 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 PCNX2A6NKB5 2137 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 COL6A3P12111 3177 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 ANKRD33BA6NCL7 494 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 LILRA5A6NI73 299 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 TNFSF11O14788 317 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 RGS11O94810 467 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF35P13682 527 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 GNB3P16520 340 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 RAB3AP20336 220 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 ENPP1P22413 925 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 OPRM1P35372 400 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 AGFG1P52594 562 aaKnown RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 AKR1C2P52895 323 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 AKR1C1Q04828 323 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 GPR155Q7Z3F1 870 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 TRAPPC6BQ86SZ2 158 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 C20orf196Q8IYI0 205 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 OR6F1Q8NGZ6 308 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 OR2AE1Q8NHA4 323 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 CST11Q9H112 138 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 C20orf85Q9H1P6 137 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 SLC6A15Q9H2J7 730 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 GPR84Q9NQS5 396 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 LRP12Q9Y561 859 aa10.02□□□□□ -0.81
HDAC6-203ENST00000376619 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-203ENST00000376619 A0A1W2PR80 420 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 TMEM212A6NML5 194 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 ADAM10O14672 748 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 PEX14O75381 377 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 DUSP1P28562 367 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 ETV6P41212 452 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 HTR5AP47898 357 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 IL13RA1P78552 427 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 MGAT2Q10469 447 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 ASAH1Q13510 395 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 WIPI1Q5MNZ9 446 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-203ENST00000376619 CNEP1R1Q8N9A8 125 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 THOC3Q96J01 351 aaKnown RBP10.01□□□□□ -0.81
HDAC6-203ENST00000376619 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-203ENST00000376619 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 PLEKHJ1Q9NW61 149 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 USP34Q70CQ2 3546 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 STMND1H3BQB6 276 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 OR7C1O76099 320 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-203ENST00000376619 SERPINA5P05154 406 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 B4GALT1P15291 398 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 PNLIPP16233 465 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 ZNF93P35789 620 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-203ENST00000376619 SSR4P51571 173 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 GABREP78334 506 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 PMPCAQ10713 525 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 RSU1Q15404 277 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 LINC00303Q3SY05 128 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 C3orf33Q6P1S2 294 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 CD300LDQ6UXZ3 194 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 AKR7LQ8NHP1 331 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 C11orf40Q8WZ69 217 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 STRADBQ9C0K7 418 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 LAT2Q9GZY6 243 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 PRR13Q9NZ81 148 aa10.01□□□□□ -0.81
HDAC6-203ENST00000376619 NOTCH2Q04721 2471 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms