RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 YIF1BQ5BJH7 314 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ZNF766Q5HY98 468 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 UNQ9370/PRO34162Q6UXP9 181 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 DCDC5Q6ZRR9 648 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 AP3S1Q92572 193 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 ALKBH3Q96Q83 286 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-206ENST00000376496 KLHL9Q9P2J3 617 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 FLVCR1Q9Y5Y0 555 aa11.15□□□□□ -0.62
CLCN6-206ENST00000376496 TNRC6AQ8NDV7 1962 aaKnown RBP11.15□□□□□ -0.62
CLCN6-206ENST00000376496 LOC102725191A0A1B0GVB3 256 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 FABP12A6NFH5 140 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 EFSO43281 561 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 SSX4O60224 188 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 MAS1P04201 325 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 H2BFMP0C1H6 154 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 TAB1Q15750 504 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 SLC22A16Q86VW1 577 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 SAMD12Q8N8I0 201 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 IL17RDQ8NFM7 739 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.63
CLCN6-206ENST00000376496 TMEM106AQ96A25 262 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 ZNF416Q9BWM5 594 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 PALMDQ9NP74 551 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 KLK13Q9UKR3 277 aa11.15□□□□□ -0.63
CLCN6-206ENST00000376496 APC2O95996 2303 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 TMEM269A0A1B0GVZ9 245 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 ZNF432O94892 652 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 HPNP05981 417 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 EIF4EP06730 217 aaKnown RBP11.14□□□□□ -0.63
CLCN6-206ENST00000376496 CD46P15529 392 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 ADRA2CP18825 462 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 RRADP55042 308 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 CLDN18P56856 261 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 PCK2Q16822 640 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 Q499Y3 187 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-206ENST00000376496 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 SLC7A6Q92536 515 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 B3GNT3Q9Y2A9 372 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 KLF13Q9Y2Y9 288 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-206ENST00000376496 SVILO95425 2214 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 TLX3O43711 291 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-206ENST00000376496 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 ETV6P41212 452 aa11.14□□□□□ -0.63
CLCN6-206ENST00000376496 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
CLCN6-206ENST00000376496 DOCK7Q96N67 2140 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 P2RY10O00398 339 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TMCC2O75069 709 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 SRSF10O75494 262 aaKnown RBP11.13□□□□□ -0.63
CLCN6-206ENST00000376496 GATBO75879 557 aaKnown RBP11.13□□□□□ -0.63
CLCN6-206ENST00000376496 AQP8O94778 261 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 VAMP5O95183 116 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 PATE4P0C8F1 98 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 EPXP11678 715 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 GALK2Q01415 458 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 RASGEF1BQ0VAM2 473 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 CDC20Q12834 499 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TEX30Q5JUR7 227 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 Q6ZNX1 250 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 FCRLAQ7L513 359 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 LINGO2Q7L985 606 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 CATSPERDQ86XM0 798 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 FNDC9Q8TBE3 224 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 RNF133Q8WVZ7 376 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 WDFY2Q96P53 400 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 ULBP2Q9BZM5 246 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 FAM117AQ9C073 453 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 SRRQ9GZT4 340 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 EXO5Q9H790 373 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 KLRC4-KLRK1H3BQV0 150 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 GLSO94925 669 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-206ENST00000376496 HRGP04196 525 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 SPNP16150 400 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TNFSF10P50591 281 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 FOXC1Q12948 553 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 AAED1Q7RTV5 226 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 UBE2J2Q8N2K1 259 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 POC5Q8NA72 575 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TEX19Q8NA77 164 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 OR2AJ1Q8NGZ0 328 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TMEM54Q969K7 222 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 G6PC2Q9NQR9 355 aa11.13□□□□□ -0.63
CLCN6-206ENST00000376496 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 TRBV5-5A0A0J9YX44 114 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 CD1AP06126 327 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 OCMP0CE72 109 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-206ENST00000376496 POU4F3Q15319 338 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 C9orf135Q5VTT2 229 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 ASPHD2Q6ICH7 369 aa11.12□□□□□ -0.63
CLCN6-206ENST00000376496 STAC2Q6ZMT1 411 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms