RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 FXNQ16595 210 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 RTP2Q5QGT7 225 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 AADACL3Q5VUY0 350 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-204ENST00000375290 PDFQ9HBH1 243 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 IL20RAQ9UHF4 553 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 XRCC2O43543 280 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 TRAF3IP2O43734 574 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-204ENST00000375290 IGLV3-27P01718 113 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 IL2RGP31785 369 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 TNFRSF4P43489 277 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 SLC6A11P48066 632 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 ID2Q02363 134 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 METRNLQ641Q3 311 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 PRSS58Q8IYP2 241 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 OR4A16Q8NH70 328 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 GMPPAQ96IJ6 420 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-204ENST00000375290 ULBP2Q9BZM5 246 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 H0YIG0 161 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 RPS15P62841 145 aaKnown RBP9.33□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM52BQ4KMG9 183 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 OR2T2Q6IF00 324 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
PTCH1-204ENST00000375290 ZNF727A8MUV8 499 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 RNASEK-C17orf49H0YIS7 233 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ABCD3P28288 659 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 GJA5P36382 358 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 FASLGP48023 281 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 RBP2P50120 134 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 PLGLAQ15195 96 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 H1FNTQ75WM6 255 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM255BQ8WV15 326 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SGCZQ96LD1 299 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 KCND3Q9UK17 655 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 BOKQ9UMX3 212 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-204ENST00000375290 NCR3LG1Q68D85 454 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TMPRSS11FQ6ZWK6 438 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ZNF439Q8NDP4 499 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 FGF14Q92915 247 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 GPR62Q9BZJ7 368 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 FTSJ1Q9UET6 329 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 EMC9Q9Y3B6 208 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SPINT2O43291 252 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 CHRM4P08173 479 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 CRYBB2P43320 205 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 NOVA1P51513 510 aaKnown RBP9.32□□□□□ -0.92
PTCH1-204ENST00000375290 IL20RBQ6UXL0 311 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 USP53Q70EK8 1073 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 NOL4LQ96MY1 436 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-204ENST00000375290 RTP3Q9BQQ7 232 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TM7SF3Q9NS93 570 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 PRSS38A1L453 326 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 CXorf65A6NEN9 183 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ZNF860A6NHJ4 632 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 HCRTR1O43613 425 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 GYPBP06028 91 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TIMP2P16035 220 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 HYAL2Q12891 473 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 OR7A5Q15622 319 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 MTURNQ8N3F0 131 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 PGBD5Q8N414 524 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 NARFLQ9H6Q4 476 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 A8MUA0 341 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 OR8G3PP0DMU2 310 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 DSC1Q08554 894 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 NFATC4Q14934 902 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 BEX5Q5H9J7 111 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 PTOV1Q86YD1 416 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 WDR34Q96EX3 536 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TRIP11Q15643 1979 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 CST2P09228 141 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 IL13RA2Q14627 380 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SLC16A14Q7RTX9 510 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 LMX1AQ8TE12 382 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SOX7Q9BT81 388 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 A0A1W2PP55 124 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 PLPP1O14494 284 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 SUSD5O60279 629 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 LIPNQ5VXI9 398 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 TEX37Q96LM6 180 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 RAB40CQ96S21 281 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ELAVL1Q15717 326 aaKnown RBP9.32□□□□□ -0.92
PTCH1-204ENST00000375290 CARFQ8N187 725 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ALKBH4Q9NXW9 302 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 C5AR2Q9P296 337 aa9.32□□□□□ -0.92
PTCH1-204ENST00000375290 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 IGHA2P01877 340 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 SULT1A2P50226 295 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 GAB1Q13480 694 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 RAB24Q969Q5 203 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 VPS25Q9BRG1 176 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 LAT2Q9GZY6 243 aa9.31□□□□□ -0.92
PTCH1-204ENST00000375290 PRSS21Q9Y6M0 314 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms