RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CPPED1Q9BRF8 314 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 SLC2A8Q9NY64 477 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 USP3Q9Y6I4 520 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 GLOD5A6NK44 160 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 IQCF5A8MTL0 148 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SMAD3P84022 425 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 ARL16Q0P5N6 197 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 C18orf21Q32NC0 220 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 PRR36Q9H6K5 1346 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 PLPP2O43688 288 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF28P17035 718 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 TP53I3Q53FA7 332 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF813Q6ZN06 617 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF765Q7L2R6 523 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 OR2A1Q8NGT9 310 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MAP1BP46821 2468 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 NPY1RP25929 384 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 BLVRBP30043 206 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 CCR2P41597 374 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 PPIAP62937 165 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 OR2M7Q8NG81 312 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 GTF3AQ92664 365 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 WDR18Q9BV38 432 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ULBP3Q9BZM4 244 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.07□□□□□ -1.446e-16■■□□□ 13.8
UBR4-204ENST00000375254 ASB1Q9Y576 335 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF593O00488 134 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 GAGE1Q13065 139 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 EOGTQ5NDL2 527 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 OR4A16Q8NH70 328 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SLC38A5Q8WUX1 472 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 BCL2L2Q92843 193 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 SNX22Q96L94 193 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SPATC1LQ9H0A9 340 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SMOC2Q9H3U7 446 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ABHD16BQ9H3Z7 469 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 COL1A2P08123 1366 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 HSD17B6O14756 317 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ENSAO43768 121 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 ADAP1O75689 374 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 GABRA4P48169 554 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 BPIFB3P59826 476 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 CRMP1Q14194 572 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MYPOPQ86VE0 399 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 IGSF21Q96ID5 467 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SLC7A7Q9UM01 511 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 TRBV4-1A0A0J9YWV2 114 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 C4orf47A7E2U8 309 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF385BQ569K4 471 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 FZD1Q9UP38 647 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 F3P13726 295 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 OR10G8Q8NGN5 311 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 WFIKKN2Q8TEU8 576 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 JKAMPQ9P055 326 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF17P17021 662 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 CD1CP29017 333 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 IL24Q13007 206 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 FCRL6Q6DN72 434 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MRGPRDQ8TDS7 321 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 KTI12Q96EK9 354 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 APIPQ96GX9 242 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 BCAS3Q9H6U6 928 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 A6NLC8 198 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 LEFTY2O00292 366 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ZNF253O75346 499 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 HERVK_113P61574 105 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 FOXK2Q01167 660 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MEF2AQ02078 507 aaPredicted RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 OR5A1Q8NGJ0 315 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 PCED1BQ96HM7 432 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SMIM35A0A1B0GVV1 85 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 F2RP25116 425 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 LCN2P80188 198 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 LCN15Q6UWW0 184 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MTMR14Q8NCE2 650 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 MASP2O00187 686 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 SIRPB1O00241 398 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 EOMESO95936 686 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 RPS4Y1P22090 263 aaKnown RBP6.07□□□□□ -1.44
UBR4-204ENST00000375254 PSMB2P49721 201 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 PYCR3Q53H96 274 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 TMEM156Q8N614 296 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 ORAI2Q96SN7 254 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 FOXJ3Q9UPW0 622 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 COMPP49747 757 aaPredicted RBP6.06□□□□□ -1.44
UBR4-204ENST00000375254 IFITM2Q01629 132 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 MOB3CQ70IA8 216 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 CPT1CQ8TCG5 803 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 CERKQ8TCT0 537 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 NANOS1Q8WY41 292 aaKnown RBP6.06□□□□□ -1.44
UBR4-204ENST00000375254 DDIT4LQ96D03 193 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 PELI2Q9HAT8 420 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 SOX21Q9Y651 276 aaPredicted RBP6.06□□□□□ -1.44
UBR4-204ENST00000375254 CLEC3AO75596 197 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 PPP1R3DO95685 299 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 XCR1P46094 333 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 WBP2NLQ6ICG8 309 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 CLEC14AQ86T13 490 aa6.06□□□□□ -1.44
UBR4-204ENST00000375254 NEURL3Q96EH8 262 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms