RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MADCAM1Q13477 382 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TOMM20Q15388 145 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 C10orf128Q5T292 105 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 C19orf18Q8NEA5 215 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DEFB124Q8NES8 71 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZNF671Q8TAW3 534 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TSEN15Q8WW01 171 aaKnown RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FAM173AQ9BQD7 235 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 UTP23Q9BRU9 249 aaKnown RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 WACQ9BTA9 647 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 C11orf54Q9H0W9 315 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FBXL3Q9UKT7 428 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LHFPL6Q9Y693 200 aa15.99■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CNTRLQ7Z7A1 2325 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TRAV8-7A0A075B6U6 113 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PINLYPA6NC86 204 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NPIPA2E9PIF3 369 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NPIPA3F8WFD2 350 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 UBL3O95164 117 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 QDPRP09417 244 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FTH1P19P0C7X4 201 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ACHEP22303 614 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SUCLG1P53597 346 aaKnown RBP15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SCAND1P57086 179 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 MFAP5Q13361 173 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 HES5Q5TA89 166 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 HACD4Q5VWC8 232 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CARD17Q5XLA6 110 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LRFN4Q6PJG9 635 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FOXL2NBQ6ZUU3 175 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ESPNLQ6ZVH7 1005 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZNF433Q8N7K0 673 aaPredicted RBP15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CHAC2Q8WUX2 184 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ADGRG7Q96K78 797 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FER1L6-AS2Q96M78 137 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR2M2Q96R28 347 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 UCN2Q96RP3 112 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SRXN1Q9BYN0 137 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GLTPQ9NZD2 209 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR52A1Q9UKL2 312 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 EMC9Q9Y3B6 208 aa15.98■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LINC01387J3KSC0 135 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SMAD9O15198 467 aaKnown RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FSTP19883 344 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ITGA3P26006 1051 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CSNK1A1P48729 337 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ODF4Q2M2E3 257 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CORO6Q6QEF8 472 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZNF704Q6ZNC4 412 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DTX1Q86Y01 620 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TMEM123Q8N131 208 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DRAXINQ8NBI3 349 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR10S1Q8NGN2 331 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 INTS12Q96CB8 462 aaKnown RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ZC3HAV1LQ96H79 300 aaKnown RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SFXN2Q96NB2 322 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GDF2Q9UK05 429 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GTF2A1LQ9UNN4 478 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 DHDHQ9UQ10 334 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ETV7Q9Y603 341 aa15.97■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CDRT15L2A8MXV6 281 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 UBCP0CG48 685 aaKnown RBP15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GDF1P27539 372 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ID4P47928 161 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GFRA1P56159 465 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CLDN20P56880 219 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 GABREP78334 506 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PITPNAQ00169 270 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SPINK14Q6IE38 97 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TMPRSS12Q86WS5 348 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 IL22RA1Q8N6P7 574 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CELF2-AS1Q8N7Q2 184 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 OR2M7Q8NG81 312 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 ASB5Q8WWX0 329 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 TRIM63Q969Q1 353 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 PNPLA2Q96AD5 504 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NEDD4LQ96PU5 975 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 NIPAL2Q9H841 368 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 SEC61A2Q9H9S3 476 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 LIN7BQ9HAP6 207 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FAM206AQ9NX38 181 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 HHLA2Q9UM44 414 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 FOXJ3Q9UPW0 622 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 CAMK2AQ9UQM7 478 aa15.96■□□□□ 0.15
HLA-DQB1-201ENST00000374943 IGHV3-15A0A0B4J1V0 119 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TMEM269A0A1B0GVZ9 245 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ANXA2P2A6NMY6 339 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF878C9JN71 531 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CD2P06729 351 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ANXA2P07355 339 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ENPP1P22413 925 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MAP2K3P46734 347 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LSM6P62312 80 aaKnown RBP15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TMEM244Q5VVB8 128 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 KLHL24Q6TFL4 600 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZIC4Q8N9L1 334 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR2AJ1Q8NGZ0 328 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PPP1R14AQ96A00 147 aa15.95■□□□□ 0.14
HLA-DQB1-201ENST00000374943 RFT1Q96AA3 541 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms