RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 DVL2O14641 736 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 MSTNO14793 375 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 APOL3O95236 402 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 MPZL1O95297 269 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 ITGA5P08648 1049 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 ADRA2AP08913 450 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 CPEP16870 476 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 NPR2P20594 1047 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 MSR1P21757 451 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 BMP5P22003 454 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 GNLYP22749 145 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 NAA10P41227 235 aaPredicted RBP12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 ETV1P50549 477 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 FOXG1P55316 489 aaPredicted RBP12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 NCS1P62166 190 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 MEP1BQ16820 701 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 PCK2Q16822 640 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 TEX30Q5JUR7 227 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 BEND4Q6ZU67 534 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 SLC16A9Q7RTY1 509 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 KLHL36Q8N4N3 616 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF610Q8N9Z0 462 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 BORCS5Q969J3 196 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 OPN3Q9H1Y3 402 aaPredicted RBP12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 CCDC59Q9P031 241 aaKnown RBP12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 KCNG2Q9UJ96 466 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 FREM1Q5H8C1 2179 aa12.86□□□□□ -0.35
SMPDL3B-201ENST00000373888 INTS1Q8N201 2190 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 PEX14O75381 377 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF823P16415 610 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 COX5AP20674 150 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ENTPD1P49961 510 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 LSM6P62312 80 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ACTC1P68032 377 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ACTA1P68133 377 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ADAM8P78325 824 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ARF1P84077 181 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 SHFQ7M4L6 423 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 FJX1Q86VR8 437 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 ACBD7Q8N6N7 88 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR10H5Q8NGA6 315 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 RPL3LQ92901 407 aaKnown RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 MNTQ99583 582 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 MMP27Q9H306 513 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 HMG20AQ9NP66 347 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 RABL2AQ9UBK7 228 aaPredicted RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 CAB39Q9Y376 341 aaPredicted RBP12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
SMPDL3B-201ENST00000373888 A8MXE2 369 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 INHBBP09529 407 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR2T7P0C7T2 308 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 PSKH1P11801 424 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 B4GALT1P15291 398 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SOX6P35712 828 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 ADORA2A-AS1P86434 159 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 BDH1Q02338 343 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 TGFBR3Q03167 851 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 TPBGQ13641 420 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 P2RY6Q15077 328 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SSX1Q16384 188 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SGCAQ16586 387 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF474Q6S9Z5 364 aaPredicted RBP12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF813Q6ZN06 617 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 CDC20BQ86Y33 519 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SLC22A24Q8N4F4 322 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 RELL2Q8NC24 303 aaPredicted RBP12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR2T27Q8NH04 317 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 GIMAP1Q8WWP7 306 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 HTRA1Q92743 480 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 UFD1Q92890 307 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 CCDC120Q96HB5 630 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 CHCHD6Q9BRQ6 235 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 ZNF416Q9BWM5 594 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 OR51E2Q9H255 320 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 EMC7Q9NPA0 242 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 CYB5R1Q9UHQ9 305 aa12.84□□□□□ -0.35
SMPDL3B-201ENST00000373888 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms