RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TMEM205Q6UW68 189 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 THNSL2Q86YJ6 484 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 GJD3Q8N144 294 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM229BQ8NBD8 167 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 NAXEQ8NCW5 288 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 OR51D1Q8NGF3 324 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 OR13C2Q8NGS9 318 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ZPBPQ9BS86 351 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 SLC25A31Q9H0C2 315 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 A6NNC1 897 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 LYL1P12980 280 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 NTSP30990 170 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 SERPINF1P36955 418 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 RHOAP61586 193 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ACTA2P62736 377 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ACTG2P63267 376 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 IL13RA1P78552 427 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 GUK1Q16774 197 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 AWAT2Q6E213 333 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF529Q6P280 563 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 FAM129CQ86XR2 697 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 FAM219AQ8IW50 185 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 OR51L1Q8NGJ5 315 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 AQP10Q96PS8 301 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 NMES1Q9C002 83 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 PARP12Q9H0J9 701 aaKnown RBP8.63□□□□□ -1.03
SF3A3-201ENST00000373019 SLC2A8Q9NY64 477 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 IL17BQ9UHF5 180 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 SCN10AQ9Y5Y9 1956 aa8.63□□□□□ -1.03
SF3A3-201ENST00000373019 C13orf42A0A1B0GVH6 325 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TBX19O60806 448 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TRGC1P0CF51 173 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 NAA10P41227 235 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TSFMP43897 325 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM268Q5VZI3 342 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM173Q86WV6 379 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TDHQ8IZJ6 230 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 OR52L1Q8NGH7 329 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 PHB2Q99623 299 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 MCHR1Q99705 422 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 G6PC3Q9BUM1 346 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM269A0A1B0GVZ9 245 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 SOCS5O75159 536 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 MAS1P04201 325 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 OR2T7P0C7T2 308 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 NPY4RP50391 375 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 GATMP50440 423 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TBPL1P62380 186 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 RBX1P62877 108 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TAF10Q12962 218 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM35AQ53FP2 167 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 OR2T27Q8NH04 317 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF563Q8TA94 476 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF480Q8WV37 535 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 FRZBQ92765 325 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 C16orf58Q96GQ5 468 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 THOC3Q96J01 351 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF587Q96SQ5 575 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 CD180Q99467 661 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 GLIPR2Q9H4G4 154 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ZCCHC3Q9NUD5 404 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 FARSAQ9Y285 508 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 LDLRAD4O15165 306 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ZNF28P17035 718 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 PBLDP30039 288 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 PRKAG1P54619 331 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 RAB30Q15771 203 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 SLC24A5Q71RS6 500 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 CD163Q86VB7 1156 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TRAPPC5Q8IUR0 188 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 HSD17B11Q8NBQ5 300 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 ADAD2Q8NCV1 583 aaKnown RBP8.62□□□□□ -1.03
SF3A3-201ENST00000373019 IGFLR1Q9H665 355 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 CLDND1Q9NY35 253 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 CALML5Q9NZT1 146 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 SIGLEC7Q9Y286 467 aa8.62□□□□□ -1.03
SF3A3-201ENST00000373019 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 SMCO3A2RU48 225 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 DVL1O14640 695 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 HMGN2P05204 90 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 GNALP38405 381 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 ACTBP60709 375 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 ACTG1P63261 375 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 NKX6-1P78426 367 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 LASP1Q14847 261 aaKnown RBP8.61□□□□□ -1.03
SF3A3-201ENST00000373019 TMEM31Q5JXX7 168 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 AKR1C8PQ5T2L2 129 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
SF3A3-201ENST00000373019 JAGN1Q8N5M9 183 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms