RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 DOK5Q9P104 306 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 DAPP1Q9UN19 280 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC17A4Q9Y2C5 497 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM269A0A1B0GVZ9 245 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR6C76A6NM76 312 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SNRPGP62308 76 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 GAB1Q13480 694 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TAF9Q16594 264 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 GLYR1Q49A26 553 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 MFSD12Q6NUT3 480 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM207Q6UWW9 146 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CARFQ8N187 725 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR4K15Q8NH41 348 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 DYNC2LI1Q8TCX1 351 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SCARB1Q8WTV0 552 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 GHSRQ92847 366 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM221A6NGB7 291 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 M0R296 226 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 ELAVL4P26378 380 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CCKARP32238 428 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TRHRP34981 398 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 HTR5AP47898 357 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 MFGE8Q08431 387 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 BAK1Q16611 211 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC22A6Q4U2R8 563 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLX4IPQ5VYV7 408 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 STACQ99469 402 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 C1QBP02746 253 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ADRB1P08588 477 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 EPHA5P54756 1037 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ARF6P62330 175 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR2J1Q9GZK6 312 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 LANCL2Q9NS86 450 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 B4DXG7 233 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 GLSO94925 669 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 PPT1P50897 306 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 EFNA3P52797 238 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 HAGHQ16775 308 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 VHLLQ6RSH7 139 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZFP62Q8NB50 900 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR52N1Q8NH53 320 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 IL17BQ9UHF5 180 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 PITPNC1Q9UKF7 332 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 CST2P09228 141 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 NME1P15531 152 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 HAAOP46952 286 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 IL10RAQ13651 578 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC36A2Q495M3 483 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ADAM5Q6NVV9 412 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 CLRN3Q8NCR9 226 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 MED20Q9H944 212 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ACOXLQ9NUZ1 547 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TNFSF12O43508 249 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 NUDT21O43809 227 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 RPL29P47914 159 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 GPR155Q7Z3F1 870 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR13C9Q8NGT0 318 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 LINC00615Q96LM1 132 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 USB1Q9BQ65 265 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 MED18Q9BUE0 208 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 PARD6GQ9BYG4 376 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC23A2Q9UGH3 650 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ZNF256Q9Y2P7 627 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 R4GN57 208 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ITGB2P05107 769 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TBPL2Q6SJ96 375 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 MOB3CQ70IA8 216 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 UBAC2Q8NBM4 344 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 STT3BQ8TCJ2 826 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 ASIC5Q9NY37 505 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 TP53TG5Q9Y2B4 290 aa12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
RAPGEF1-201ENST00000372189 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRRX1P54821 245 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 ASAH1Q13510 395 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PLGLAQ15195 96 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC30A7Q8NEW0 376 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR1N1Q8NGS0 311 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 PHYHIPQ92561 330 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 NRSN2Q9GZP1 204 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 NXF5Q9H1B4 397 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 FBXO8Q9NRD0 319 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 C4orf47A7E2U8 309 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 WNT11O96014 354 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 Q499Y3 187 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 VWA2Q5GFL6 755 aa12.18□□□□□ -0.46
RAPGEF1-201ENST00000372189 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms