RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CDK20Q8IZL9 346 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 AQP3Q92482 292 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PHF3Q92576 2039 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MALSU1Q96EH3 234 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 C4orf45Q96LM5 186 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 GPX7Q96SL4 187 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 LRG1P02750 347 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MT-ND4LP03901 98 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ARG1P05089 322 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SMIM10L1P0DMW3 83 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 CPMP14384 443 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PAX1P15863 534 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PBX2P40425 430 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 RBM34P42696 430 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PMPCAQ10713 525 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PCK2Q16822 640 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PRICKLE4Q2TBC4 344 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF765Q7L2R6 523 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 OR2I1PQ8NGU4 316 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 FOXRED1Q96CU9 486 aaPredicted RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SMIM10Q96HG1 83 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF285Q96NJ3 590 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 TEX101Q9BY14 249 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 ADAP2Q9NPF8 381 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 SPHK2Q9NRA0 654 aa10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 MRPS33Q9Y291 106 aaKnown RBP10.49□□□□□ -0.73
SMARCA1-201ENST00000371121 PCNX3Q9H6A9 2034 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 C7orf77A4D0Y5 90 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 MAS1LP35410 378 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 PSG6Q00889 435 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 TAF1CQ15572 869 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 MESTQ5EB52 335 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 PAPD4Q6PIY7 484 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 GPR148Q8TDV2 347 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF514Q96K75 400 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 OR5B2Q96R09 309 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 POTEKPQ9BYX7 375 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 PCBD2Q9H0N5 130 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 MASP2O00187 686 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 FGF17O60258 216 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 LILRB3O75022 631 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 FBXO24O75426 580 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ITGA3P26006 1051 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 LAP3P28838 519 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 GSK3AP49840 483 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ADPRHP54922 357 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ACTBP60709 375 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ACTG1P63261 375 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 EIF2B1Q14232 305 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ANGPTL5Q86XS5 388 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 FAM24BQ8N5W8 94 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 RBM18Q96H35 190 aaKnown RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 TGM7Q96PF1 710 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC17A9Q9BYT1 436 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 CHST5Q9GZS9 411 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 DUSP15Q9H1R2 295 aaPredicted RBP10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 SLC17A5Q9NRA2 495 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 STARD10Q9Y365 291 aa10.48□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF736B4DX44 427 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 PRRT4C9JH25 899 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 HRKO00198 91 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 BCAT2O15382 392 aaPredicted RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 RAB28P51157 221 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 IL13RA1P78552 427 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 EGR4Q05215 589 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 UNC119Q13432 240 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CLINT1Q14677 625 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 TSC22D1Q15714 1073 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF260Q3ZCT1 412 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 Q3ZCU0 254 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 AKIRIN2Q53H80 203 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 PRAMEF17Q5VTA0 474 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 DPY19L4Q7Z388 723 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 MDGA2Q7Z553 956 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 PNLDC1Q8NA58 520 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CCDC54Q8NEL0 328 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 OR52E1Q8NGJ3 308 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 FLVCR1-AS1Q8TAF5 88 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ZNF417Q8TAU3 575 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CTHRC1Q96CG8 243 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 KIRREL1Q96J84 757 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 NMES1Q9C002 83 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 MBNL1Q9NR56 388 aaKnown RBP10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 DUSP22Q9NRW4 184 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 PTPRSQ13332 1948 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 SERPINA5P05154 406 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 ADRB3P13945 408 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 CDK3Q00526 305 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 TCEAL5Q5H9L2 206 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 KCTD9Q7L273 389 aa10.47□□□□□ -0.73
SMARCA1-201ENST00000371121 MFSD9Q8NBP5 474 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms