RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 DGCR2P98153 550 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 SNTB2Q13425 540 aaKnown RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 RNASE12Q5GAN4 147 aaKnown RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 NAXDQ8IW45 347 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 AGBL5Q8NDL9 886 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 OR10G3Q8NGC4 313 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 OR5M9Q8NGP3 310 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 ST8SIA1Q92185 356 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 MRPL48Q96GC5 212 aaKnown RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 ARL5BQ96KC2 179 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 WDR54Q9H977 334 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 ZNF275Q9NSD4 429 aaPredicted RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 C19orf25Q9UFG5 118 aaPredicted RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 MRM2Q9UI43 246 aaKnown RBP11.5□□□□□ -0.57
GPC3-201ENST00000370818 VDAC3Q9Y277 283 aa11.5□□□□□ -0.57
GPC3-201ENST00000370818 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 TRAV1-2A0A0B4J238 106 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 PRSS37A4D1T9 235 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 SSX5O60225 188 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 FZD7O75084 574 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 UPK3AO75631 287 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 RP2O75695 350 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 AHSA1O95433 338 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 S100A6P06703 90 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 UCHL1P09936 223 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 DLX5P56178 289 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 RPL27P61353 136 aaKnown RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 TRA2AQ13595 282 aaKnown RBP eCLIP11.49□□□□□ -0.572e-7■■□□□ 13.6
GPC3-201ENST00000370818 CORO6Q6QEF8 472 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 TMUB2Q71RG4 321 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 NANPQ8TBE9 248 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 CA10Q9NS85 328 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 EDARQ9UNE0 448 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 GATBO75879 557 aaKnown RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 DKK1O94907 266 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 ZFPL1O95159 310 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 CYC1P08574 325 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 OR8G3PP0DMU2 310 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 RAB3BP20337 219 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 SUMO3P55854 103 aaPredicted RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 INSM1Q01101 510 aaPredicted RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 PCOLCEQ15113 449 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 UNQ9370/PRO34162Q6UXP9 181 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 DPY19L4Q7Z388 723 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 ADAD1Q96M93 576 aaKnown RBP11.49□□□□□ -0.57
GPC3-201ENST00000370818 TXNIPQ9H3M7 391 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 KLRF1Q9NZS2 232 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 MGAT4CQ9UBM8 478 aa11.49□□□□□ -0.57
GPC3-201ENST00000370818 LOC102723996A0A087X1L8 192 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ETV2O00321 342 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 XKRYO14609 159 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OR2T1O43869 369 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 GPRIN2O60269 458 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 UMODP07911 640 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 HLA-DOBP13765 273 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ALOX5APP20292 161 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 FOXF1Q12946 379 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 LIPNQ5VXI9 398 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OTPQ5XKR4 325 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 SLC22A10Q63ZE4 541 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 C5orf46Q6UWT4 87 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 SPICQ8N5J4 248 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OR11G2Q8NGC1 345 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ELP5Q8TE02 316 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 SMAD5Q99717 465 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 C7orf50Q9BRJ6 194 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 B9D1Q9UPM9 204 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OR2M5A3KFT3 312 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 SHISA8B8ZZ34 492 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 PIN1P1O15428 100 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 NDUFS6O75380 124 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 IGHMP01871 453 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 RLN2P04090 185 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ACAA1P09110 424 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 GIPP09681 153 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 APOBEC1P41238 236 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 MMP15P51511 669 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 SEC61A1P61619 476 aaKnown RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 MC2RQ01718 297 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 KLF9Q13886 244 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 INPP5JQ15735 1006 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 MICBQ29980 383 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
GPC3-201ENST00000370818 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 KDM8Q8N371 416 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OR1M1Q8NGA1 313 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 OR6N2Q8NGY6 317 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ORAI1Q96D31 301 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 ZFP3Q96NJ6 502 aa11.48□□□□□ -0.57
GPC3-201ENST00000370818 RASL10BQ96S79 203 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms