RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PTCHD4Q6ZW05 846 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MOB3CQ70IA8 216 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SIAH3Q8IW03 269 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 KDM8Q8N371 416 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 LNX2Q8N448 690 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TMEM99Q8N816 258 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TCEANCQ8N8B7 351 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SETD9Q8NE22 299 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 OR5J2Q8NH18 312 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TEX47Q8TBZ9 253 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SMPDL3BQ92485 455 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SGCDQ92629 289 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MIB2Q96AX9 1013 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ADGRG7Q96K78 797 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SFXN2Q96NB2 322 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IL4I1Q96RQ9 567 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 DDOQ99489 341 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 APOL4Q9BPW4 351 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IFT27Q9BW83 186 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SRXN1Q9BYN0 137 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ADNPQ9H2P0 1102 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZDHHC11Q9H8X9 412 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ACKR4Q9NPB9 350 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZNF71Q9NQZ8 489 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 MRPL39Q9NYK5 338 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 B4GALT7Q9UBV7 327 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ENOPH1Q9UHY7 261 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TRAPPC4Q9Y296 219 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TP53TG5Q9Y2B4 290 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IER3IP1Q9Y5U9 82 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PKD1L2Q7Z442 2459 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 C11orf98E9PRG8 122 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MKRN2OSH3BPM6 223 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SULT2B1O00204 365 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TNFSF11O14788 317 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SURF4O15260 269 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZNHIT1O43257 154 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TLX2O43763 284 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 ATP6V1G1O75348 118 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ENTPD6O75354 484 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MTRF1O75570 445 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 B3GALNT1O75752 331 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PMS2P2O95744 297 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TXNDC12O95881 172 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 HIST1H2ABP04908 130 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 LYNP07948 512 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 CD14P08571 375 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ADORA3P0DMS8 318 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 FKBP2P26885 142 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 SLC6A6P31641 620 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MC5RP33032 325 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PCYT1AP49585 367 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 DIO1P49895 249 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SMSP52788 366 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 CLDN18P56856 261 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 NUP107P57740 925 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 CDC42P60953 191 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 H3F3AP84243 136 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 IL5RAQ01344 420 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 NHLH2Q02577 135 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZP4Q12836 540 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SNAPC1Q16533 368 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 NADK2Q4G0N4 442 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 KRT80Q6KB66 452 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 RPL13AP3Q6NVV1 102 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SLC27A4Q6P1M0 643 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 C3orf33Q6P1S2 294 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 C16orf87Q6PH81 154 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 DPY19L2P2Q6ZN68 376 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ASB18Q6ZVZ8 466 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 HIST3H2AQ7L7L0 130 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 FAM122BQ7Z309 247 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 NANOGNBQ7Z5D8 188 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SLC22A16Q86VW1 577 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 FAM185AQ8N0U4 392 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ZNF786Q8N393 782 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 EXD3Q8N9H8 876 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 BBS1Q8NFJ9 593 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 OR2T33Q8NG76 320 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TMEM163Q8TC26 289 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SLC25A43Q8WUT9 341 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 HIST1H2ACQ93077 130 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 TXNDC15Q96J42 360 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 Q96M85 177 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 ERMAPQ96PL5 475 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 TSPAN32Q96QS1 320 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 GPX7Q96SL4 187 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 RHNO1Q9BSD3 238 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 KATNB1Q9BVA0 655 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 HCAR1Q9BXC0 346 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 POLDIP3Q9BY77 421 aaKnown RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 PRORYQ9H606 182 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MED20Q9H944 212 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 MSL2Q9HCI7 577 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 CHST11Q9NPF2 352 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 SNTG1Q9NSN8 517 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PNPLA3Q9NST1 481 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PARPBPQ9NWS1 579 aa3.14□□□□□ -1.91
MCF2-202ENST00000370573 PAK1IP1Q9NWT1 392 aaPredicted RBP3.14□□□□□ -1.91
MCF2-202ENST00000370573 NDUFA13Q9P0J0 144 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms