RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SOD3P08294 240 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF35P13682 527 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 FMO3P31513 532 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 ALDH3A2P51648 485 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 BLVRAP53004 296 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 RAD23AP54725 363 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 RPS7P62081 194 aaKnown RBP12.83□□□□□ -0.36
COL9A1-204ENST00000370496 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 LYPD4Q6UWN0 246 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
COL9A1-204ENST00000370496 LINC00346Q8IVM7 164 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 MUC15Q8N387 334 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 CPEB3Q8NE35 698 aaKnown RBP12.83□□□□□ -0.36
COL9A1-204ENST00000370496 OR2AJ1Q8NGZ0 328 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 DDOQ99489 341 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 HCAR1Q9BXC0 346 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 OR51V1Q9H2C8 321 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 OR51B6Q9H340 312 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 USE1Q9NZ43 259 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 ITGB1BP2Q9UKP3 347 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 LHFPL6Q9Y693 200 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 COMMD3-BMI1R4GMX3 469 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 PDZD2O15018 2839 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 ZAR1LA6NP61 321 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 M0R129 80 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 PRODHO43272 600 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 SMPD2O60906 423 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 SPARCP09486 303 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 DANCRP0C864 163 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 FAM157BP0CG42 384 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 NR4A1P22736 598 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 APOBEC3AP31941 199 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 TTKP33981 857 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 HGFACQ04756 655 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 RAB35Q15286 201 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 KLHL12Q53G59 568 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 SLX4IPQ5VYV7 408 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 CORO6Q6QEF8 472 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF442Q9H7R0 627 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 CBLN4Q9NTU7 201 aa12.82□□□□□ -0.36
COL9A1-204ENST00000370496 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 MRPL22Q9NWU5 206 aaKnown RBP12.82□□□□□ -0.36
COL9A1-204ENST00000370496 VSTM5A8MXK1 200 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 RER1O15258 196 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 GPRIN2O60269 458 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 OR4A8P0C604 315 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ANPEPP15144 967 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 EPHA2P29317 976 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 THBS4P35443 961 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ENTPD1P49961 510 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ART1P52961 327 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 TRIP10Q15642 601 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 TMEM154Q6P9G4 183 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 DTX2Q86UW9 622 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ERI1Q8IV48 349 aaKnown RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 CPOQ8IVL8 374 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 BBS1Q8NFJ9 593 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ZNRF4Q8WWF5 429 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 TRAF4Q9BUZ4 470 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 EIF3KQ9UBQ5 218 aaKnown RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 GDF2Q9UK05 429 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 MAST4O15021 2626 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 LOC100509620A0A075B734 347 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 PRKYO43930 277 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 TMCC2O75069 709 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 GLCEO94923 617 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 LCKP06239 509 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 COX5BP10606 129 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 GSTT1P30711 240 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 GGT2P36268 569 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 SERPINF1P36955 418 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 CDKN1AP38936 164 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 SNRPD2P62316 118 aaKnown RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 LCN1P1Q5VSP4 162 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 C12orf73Q69YU5 71 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 SLC18B1Q6NT16 456 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 UNQ6126/PRO20091Q6UXV3 157 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ZBTB49Q6ZSB9 765 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 OR6N2Q8NGY6 317 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 OR1F12Q8NHA8 337 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 ZMYND19Q96E35 227 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-204ENST00000370496 PERPQ96FX8 193 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 POM121L2Q96KW2 1035 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 INTS14Q96SY0 518 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 PITX2Q99697 317 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 WDR76Q9H967 626 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
COL9A1-204ENST00000370496 CYB5R1Q9UHQ9 305 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms