RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NAT6Q93015 286 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 PIGTQ969N2 578 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 KIAA1456Q9P272 454 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 TMED7-TICAM2A0A0A6YYA0 188 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 GCAP28676 217 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 HCCSP53701 268 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 KDM4DQ6B0I6 523 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 CDCA3Q99618 268 aaPredicted RBP11.45□□□□□ -0.58
HCFC1-202ENST00000369984 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 TMED7Q9Y3B3 224 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 CCSO14618 274 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 ADRA1AP35348 466 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 CDK5Q00535 292 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 HELTA6NFD8 242 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 WNT11O96014 354 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 SLC35D3Q5M8T2 416 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 CISD2Q8N5K1 135 aaKnown RBP11.45□□□□□ -0.58
HCFC1-202ENST00000369984 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
HCFC1-202ENST00000369984 AKR1E2Q96JD6 320 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 LCORQ96JN0 433 aaPredicted RBP11.45□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM43Q9BTV4 400 aa11.45□□□□□ -0.58
HCFC1-202ENST00000369984 AHCTF1Q8WYP5 2266 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 C4orf47A7E2U8 309 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 PIGAP37287 484 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TAZQ16635 292 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 WDR88Q6ZMY6 472 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 NLRC3Q7RTR2 1065 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CDC20BQ86Y33 519 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 BANF2Q9H503 90 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 PRSS16Q9NQE7 514 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 H3BVH4 76 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 PHOX2AO14813 284 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 EIF1BO60739 113 aaKnown RBP11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CD1CP29017 333 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 LRRC26Q2I0M4 334 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 BATF2Q8N1L9 274 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 BHLHE23Q8NDY6 225 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 SPACA1Q9HBV2 294 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 KIR2DL3P43628 341 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 ZNF85Q03923 595 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 U3KQ87 197 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 MN1Q10571 1320 aaPredicted RBP11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CPEP16870 476 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 DDOSTP39656 456 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 LHX3Q9UBR4 397 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 AKAP6Q13023 2319 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 AQP7P3A6NL99 342 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 GLCEO94923 617 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 S100A8P05109 93 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 TACR1P25103 407 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 EIF1P41567 113 aaKnown RBP11.44□□□□□ -0.58
HCFC1-202ENST00000369984 MAP2K6P52564 334 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CTBSQ01459 385 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CTDSP1Q9GZU7 261 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 CHST11Q9NPF2 352 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 MPGP29372 298 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 SEMA3BQ13214 749 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
HCFC1-202ENST00000369984 COMMD1Q8N668 190 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 GLIPR2Q9H4G4 154 aa11.44□□□□□ -0.58
HCFC1-202ENST00000369984 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RTL8BQ17RB0 113 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RPUSD3Q6P087 351 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 APH1BQ8WW43 257 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 TSLPQ969D9 159 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 ZC3HAV1LQ96H79 300 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RAB18Q9NP72 206 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RNF186Q9NXI6 227 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CGGBP1Q9UFW8 167 aaPredicted RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CA3P07451 260 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 TFAP2EQ6VUC0 442 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 SLC46A1Q96NT5 459 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 DDOQ99489 341 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RNF24Q9Y225 148 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 KPTNQ9Y664 436 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 SLC10A3P09131 477 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 ZNF90Q03938 601 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CDH26Q8IXH8 852 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 OR6M1Q8NGM8 313 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 OR13C8Q8NGS7 320 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 TECTBQ96PL2 329 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 S1PR3Q99500 378 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 DNMT3BQ9UBC3 853 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 TUBAL3A6NHL2 446 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 POLR2IP36954 125 aaKnown RBP11.43□□□□□ -0.58
HCFC1-202ENST00000369984 RRADP55042 308 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 OR8G1Q15617 311 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 THEM4Q5T1C6 240 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 OR2A25A4D2G3 310 aa11.43□□□□□ -0.58
HCFC1-202ENST00000369984 CCR9P51686 369 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms