RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZNF254O75437 659 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 NPR2P20594 1047 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 FGF9P31371 208 aaPredicted RBP21.03■□□□□ 0.96
SNX3-203ENST00000368979 OPRL1P41146 370 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 RIDAP52758 137 aaKnown RBP21.03■□□□□ 0.96
SNX3-203ENST00000368979 GUSBP1Q15486 140 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 TRAM1Q15629 374 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 FAM27BQ5VT28 67 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 OR7E24Q6IFN5 339 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 FDX2Q6P4F2 183 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 USP43Q70EL4 1123 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 GHSRQ92847 366 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 WNT2BQ93097 391 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 FOXB1Q99853 325 aa21.03■□□□□ 0.96
SNX3-203ENST00000368979 KRT33AO76009 404 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 IGHV3-9P01782 118 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 ALKBH1Q13686 389 aaKnown RBP21.02■□□□□ 0.96
SNX3-203ENST00000368979 KBTBD8Q8NFY9 601 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 DYNC2LI1Q8TCX1 351 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 DCSTAMPQ9H295 470 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 PRORYQ9H606 182 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 SIAEQ9HAT2 523 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 EPG5Q9HCE0 2579 aa21.02■□□□□ 0.96
SNX3-203ENST00000368979 GABRPO00591 440 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 SRSF10O75494 262 aaKnown RBP21.01■□□□□ 0.95
SNX3-203ENST00000368979 RGS9O75916 674 aaPredicted RBP21.01■□□□□ 0.95
SNX3-203ENST00000368979 NSUN5P2Q63ZY6 315 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 ZNF585AQ6P3V2 769 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 TMEM91Q6ZNR0 172 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 RHOUQ7L0Q8 258 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 ZNF100Q8IYN0 542 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 CISD2Q8N5K1 135 aaKnown RBP21.01■□□□□ 0.95
SNX3-203ENST00000368979 HDHD5Q9BXW7 423 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 PNRC2Q9NPJ4 139 aaKnown RBP21.01■□□□□ 0.95
SNX3-203ENST00000368979 FRRS1LQ9P0K9 344 aa21.01■□□□□ 0.95
SNX3-203ENST00000368979 CD8B2A6NJW9 211 aa21■□□□□ 0.95
SNX3-203ENST00000368979 GPRIN2O60269 458 aa21■□□□□ 0.95
SNX3-203ENST00000368979 SC5DO75845 299 aa21■□□□□ 0.95
SNX3-203ENST00000368979 HIST1H3AP68431 136 aa21■□□□□ 0.95
SNX3-203ENST00000368979 SF3B4Q15427 424 aaKnown RBP eCLIP21■□□□□ 0.95
SNX3-203ENST00000368979 NRN1LQ496H8 165 aa21■□□□□ 0.95
SNX3-203ENST00000368979 HIST2H3PS2Q5TEC6 136 aa21■□□□□ 0.95
SNX3-203ENST00000368979 C22orf42Q6IC83 251 aa21■□□□□ 0.95
SNX3-203ENST00000368979 HIST2H3AQ71DI3 136 aa21■□□□□ 0.95
SNX3-203ENST00000368979 MS4A15Q8N5U1 240 aa21■□□□□ 0.95
SNX3-203ENST00000368979 C9orf106Q8NAJ2 232 aa21■□□□□ 0.95
SNX3-203ENST00000368979 KDF1Q8NAX2 398 aaPredicted RBP21■□□□□ 0.95
SNX3-203ENST00000368979 OR2G2Q8NGZ5 317 aa21■□□□□ 0.95
SNX3-203ENST00000368979 CENPMQ9NSP4 180 aa21■□□□□ 0.95
SNX3-203ENST00000368979 CACNA1BQ00975 2339 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 ZNF878C9JN71 531 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 ZNF587BE7ETH6 402 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 RER1O15258 196 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 CST2P09228 141 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 H2BFMP0C1H6 154 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 GABRA1P14867 456 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 OR3A2P47893 321 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 SERPINB10P48595 397 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 INSL4Q14641 139 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 PRSS35Q8N3Z0 413 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 LRRC18Q8N456 261 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 C4orf45Q96LM5 186 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 PDCD1LG2Q9BQ51 273 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 SLX1AQ9BQ83 275 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 C12orf49Q9H741 205 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 UPB1Q9UBR1 384 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 FBXL3Q9UKT7 428 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 CACNA1GO43497 2377 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 WDR1O75083 606 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 ZFPL1O95159 310 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 CD8BP10966 210 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 B4GALT1P15291 398 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 DCTDP32321 178 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 CCR9P51686 369 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 RPS11P62280 158 aaKnown RBP eCLIP20.99■□□□□ 0.95
SNX3-203ENST00000368979 TUBA1BP68363 451 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 TUBA1AQ71U36 451 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 FAM214BQ7L5A3 538 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 ZNF627Q7L945 461 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 SLC22A24Q8N4F4 322 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 ABHD4Q8TB40 342 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 FBXO17Q96EF6 278 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 MALT1Q9UDY8 824 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 PRSS50Q9UI38 385 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 GSTK1Q9Y2Q3 226 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 R4GMQ9 66 aa20.99■□□□□ 0.95
SNX3-203ENST00000368979 MBD3L4A6NDZ8 208 aaPredicted RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 MBD3L3A6NE82 208 aaPredicted RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 MBD3L5A6NJ08 208 aaPredicted RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 OR4C45A6NMZ5 311 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 PNPP00491 289 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 TPOP07202 933 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 PTGER4P35408 488 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 KIR3DL2P43630 455 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 MFGE8Q08431 387 aaPredicted RBP20.98■□□□□ 0.95
SNX3-203ENST00000368979 WDR38Q5JTN6 314 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 OR2A2Q6IF42 318 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 GCNT2Q8N0V5 402 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 TEX19Q8NA77 164 aa20.98■□□□□ 0.95
SNX3-203ENST00000368979 GJC3Q8NFK1 279 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms