RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 KLHL21Q9UJP4 597 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 FBXL3Q9UKT7 428 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 EDARQ9UNE0 448 aa13.04□□□□□ -0.32
SMPDL3A-201ENST00000368440 TFP02787 698 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 LYNP07948 512 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 CLUP10909 449 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 EPHA2P29317 976 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 CHN2P52757 468 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 NKX6-1P78426 367 aaPredicted RBP13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 SNTB2Q13425 540 aaKnown RBP13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 KCNMB1Q16558 191 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 ZNF774Q6NX45 483 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 IL17RDQ8NFM7 739 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC26A10Q8NG04 563 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 TMEM171Q8WVE6 324 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 PIGTQ969N2 578 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 NMNAT2Q9BZQ4 307 aa13.03□□□□□ -0.32
SMPDL3A-201ENST00000368440 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 FAM183AA6NL82 134 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 C12orf71A8MTZ7 269 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 GPRIN2O60269 458 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 CDKN1AP38936 164 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 CRISP1P54107 249 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 PLP2Q04941 152 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 MSMPQ1L6U9 139 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 C11orf71Q6IPW1 123 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 MUC15Q8N387 334 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 PARP8Q8N3A8 854 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 NUP37Q8NFH4 326 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 OR4F15Q8NGB8 312 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 RDH12Q96NR8 316 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 SLC25A19Q9HC21 320 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 MRPL22Q9NWU5 206 aaKnown RBP13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 ASH2LQ9UBL3 628 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 TIMM10BQ9Y5J6 103 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.32
SMPDL3A-201ENST00000368440 MYO9AB2RTY4 2548 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 CCDC168Q8NDH2 2452 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 LOC100509620A0A075B734 347 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 LOC100130705A0A1B0GUX0 176 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 H0YAE9 185 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 SURF4O15260 269 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 IFNGP01579 166 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 ZNF3P17036 446 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 SPI1P17947 270 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 NR4A1P22736 598 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 MYF6P23409 242 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 APOBEC3AP31941 199 aaPredicted RBP13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 THBS4P35443 961 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 PCBD1P61457 104 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 LSM6P62312 80 aaKnown RBP13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 TEKQ02763 1124 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 GLO1Q04760 184 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 TESK1Q15569 626 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 TTC23Q5W5X9 447 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 SYT9Q86SS6 491 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 FBXL14Q8N1E6 418 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 ZNF786Q8N393 782 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 POM121L2Q96KW2 1035 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 FOXC2Q99958 501 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 OR51B6Q9H340 312 aa13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
SMPDL3A-201ENST00000368440 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 TVP23AA6NH52 213 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 OVOL3O00110 214 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 PSKH1P11801 424 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 STOMP27105 288 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 APLNRP35414 380 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 AQP6Q13520 282 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 TBC1D28Q2M2D7 210 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 AGAP6Q5VW22 663 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 TMEM154Q6P9G4 183 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 LINC00346Q8IVM7 164 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 OR2T4Q8NH00 348 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 PERPQ96FX8 193 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 CXXC4Q9H2H0 198 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 CDH20Q9HBT6 801 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 FAIMQ9NVQ4 179 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
SMPDL3A-201ENST00000368440 RER1O15258 196 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 DOK2O60496 412 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 SMPD2O60906 423 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 PTHP01270 115 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 HLA-DQA2P01906 255 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 FAM157BP0CG42 384 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 CCNOP22674 350 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 RPS27P42677 84 aaKnown RBP13□□□□□ -0.33
SMPDL3A-201ENST00000368440 SLC25A1P53007 311 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 SCRN3Q0VDG4 424 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 MST1LQ2TV78 715 aa13□□□□□ -0.33
SMPDL3A-201ENST00000368440 CCDC92Q53HC0 331 aaPredicted RBP13□□□□□ -0.33
SMPDL3A-201ENST00000368440 VASH1Q7L8A9 365 aaPredicted RBP13□□□□□ -0.33
SMPDL3A-201ENST00000368440 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms