RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CEACAM3P40198 252 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC1A1P43005 524 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SYKP43405 635 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 TNNT2P45379 298 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 CSNK1A1P48729 337 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 C21orf59P57076 290 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 EIF3EP60228 445 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 ADARB1P78563 741 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SYCNQ0VAF6 134 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 PRPSAP1Q14558 356 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 GINS1Q14691 196 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 OR7A5Q15622 319 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 LINC00483Q53H64 154 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 ARL9Q6T311 187 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 NTM-AS1Q6ZSK4 140 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 RIMKLAQ8IXN7 391 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 PGAM4Q8N0Y7 254 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 FAM81AQ8TBF8 368 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 ECHDC3Q96DC8 303 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF681Q96N22 645 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 CHP1Q99653 195 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 BPIFA3Q9BQP9 254 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC25A2Q9BXI2 301 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 LINC00597Q9H2U6 94 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SAV1Q9H4B6 383 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 RPP21Q9H633 154 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 ISYNA1Q9NPH2 558 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 AGPAT4Q9NRZ5 378 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 RAB20Q9NX57 234 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 UVRAGQ9P2Y5 699 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC17A4Q9Y2C5 497 aa2.02□□□□□ -2.09
ECHDC1-201ENST00000368287 TNS2Q63HR2 1409 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 GAKO14976 1311 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 MAPK8IP3Q9UPT6 1336 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SERTM2A0A1B0GWG4 89 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 TMEM150BA6NC51 233 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 LRCOL1A6NCL2 159 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 NCBP2LA6PVI3 153 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SMKR1H3BMG3 65 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 BET1O15155 118 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 HMMRO75330 724 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 RP2O75695 350 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 OXTP01178 125 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 KRT14P02533 472 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 UBTFL6P0CB48 400 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 GTF2E2P29084 291 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 OR1E1P30953 314 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 FOXN2P32314 431 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 KIR3DL2P43630 455 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 RAP1AP62834 184 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SP4Q02446 784 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 ERCC8Q13216 396 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 XKR4Q5GH76 650 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SPANXN2Q5MJ10 180 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 C12orf54Q6X4T0 127 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 BIVMQ86UB2 503 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF561Q8N587 486 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 NOXO1Q8NFA2 376 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 OR2A1Q8NGT9 310 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 LYPD6BQ8NI32 183 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 EEF1AKMT3Q96AZ1 226 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 RBMXL1Q96E39 390 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 PDXPQ96GD0 296 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 TGS1Q96RS0 853 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 NDFIP1Q9BT67 221 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SPNS1Q9H2V7 528 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 ZNF430Q9H8G1 570 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 VPS37BQ9H9H4 285 aa2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 SAMSN1Q9NSI8 373 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 TSSC4Q9Y5U2 329 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-201ENST00000368287 ANKRD12Q6UB98 2062 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 IGHV5-10-1A0A0J9YXX1 117 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 NDUFAB1O14561 156 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 SLC9A3R1O14745 358 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 SCAMP2O15127 329 aaKnown RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 B4GALT5O43286 388 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 CTAG2O75638 210 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 FLOT1O75955 427 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 CTDNEP1O95476 244 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 CD160O95971 181 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 OTX1P32242 354 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 PMELP40967 661 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 NAMPTP43490 491 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 RGS8P57771 180 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 STXBP1P61764 594 aaKnown RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 ESRRGP62508 458 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 IRF8Q02556 426 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 MERTKQ12866 999 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 MOBPQ13875 183 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 ITIH4Q14624 930 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 SNRNP35Q16560 246 aaKnown RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 C1orf185Q5T7R7 199 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 GPR107Q5VW38 600 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 METTL21CQ5VZV1 264 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 NANOGP8Q6NSW7 305 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 ABHD12BQ7Z5M8 362 aaPredicted RBP2□□□□□ -2.09
ECHDC1-201ENST00000368287 SCD5Q86SK9 330 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 TMEM150AQ86TG1 271 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 CBLN2Q8IUK8 224 aa2□□□□□ -2.09
ECHDC1-201ENST00000368287 PQLC3Q8N755 202 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms