RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 EXD3Q8N9H8 876 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 REEP6Q96HR9 211 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 ALKBH3Q96Q83 286 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 C20orf85Q9H1P6 137 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 KCNG2Q9UJ96 466 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 FZR1Q9UM11 496 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 SLC22A13Q9Y226 551 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 NFYAP23511 347 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 MPLP40238 635 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 INSM1Q01101 510 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF92Q03936 586 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 SELENBP1Q13228 472 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 GFRALQ6UXV0 394 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF620Q6ZNG0 422 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 PRSS41Q7RTY9 318 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 DPPA2Q7Z7J5 298 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 EGLN1Q9GZT9 426 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 HEYLQ9NQ87 328 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 GPR84Q9NQS5 396 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 RAB22AQ9UL26 194 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 SLC22A20A6NK97 555 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 IMPA2O14732 288 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 EIF4EP06730 217 aaKnown RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 FOLR1P15328 257 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 SOX18P35713 384 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 GALEQ14376 348 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 WIPI1Q5MNZ9 446 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 DOK3Q7L591 496 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 OR10J5Q8NHC4 309 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 KIF25Q9UIL4 384 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 M0R135 149 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 FZD6O60353 706 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 GLRA1P23415 457 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 PPP1CAP62136 330 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-207ENST00000368226 OLIG1Q8TAK6 271 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF799Q96GE5 643 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 NUDT9Q9BW91 350 aa11.73□□□□□ -0.53
PTPRK-207ENST00000368226 OR2A25A4D2G3 310 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR10A3P58181 314 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 NANOGP1Q8N7R0 232 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 TP53I13Q8NBR0 393 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR13F1Q8NGS4 319 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR2M2Q96R28 347 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 CNTNAP3Q9BZ76 1288 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 PUS1Q9Y606 427 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 MYO7AQ13402 2215 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 THBS1P07996 1170 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 BCKDHBP21953 392 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 WDR5BQ86VZ2 330 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 ST7LQ8TDW4 575 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 LMO7DNF2Z398 122 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 MKRN2OSH3BPM6 223 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 LGALS8O00214 317 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 SBK3P0C264 359 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 RBP2P50120 134 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 PRSS36Q5K4E3 855 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 TMEM179BQ7Z7N9 219 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR6M1Q8NGM8 313 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 COL22A1Q8NFW1 1626 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 TRBV5-4A0A0C4DH59 114 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR1C1Q15619 314 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF74Q16587 644 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR1M1Q8NGA1 313 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 OR11G2Q8NGC1 345 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 SDCBPO00560 298 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 UBBP0CG47 229 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 ARRB2P32121 409 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 PPT1P50897 306 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-207ENST00000368226 SARAFQ96BY9 339 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 PRELID3BQ9Y3B1 194 aa11.72□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF816-ZNF321PA0A0X1KG74 233 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 TCRBP04435 133 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 CSF3P09919 207 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 OR8U8P0C7N1 319 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 LAP3P28838 519 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 OPRM1P35372 400 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 RHOUQ7L0Q8 258 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 GCNT2Q8N0V5 402 aa11.71□□□□□ -0.53
PTPRK-207ENST00000368226 ZNF321PQ8N8H1 164 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms