RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 TMEM91Q6ZNR0 172 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 SEM1Q6ZVN7 128 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 HIST2H3AQ71DI3 136 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 LINC00346Q8IVM7 164 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
VTA1-201ENST00000367621 C9orf106Q8NAJ2 232 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 CPT1CQ8TCG5 803 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 THEM6Q8WUY1 208 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 SNX33Q8WV41 574 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 RNF133Q8WVZ7 376 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 ASB17Q8WXJ9 295 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 HSD17B8Q92506 261 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 UFD1Q92890 307 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 TM9SF2Q99805 663 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 ULBP2Q9BZM5 246 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 SEC61A2Q9H9S3 476 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 CALHM2Q9HA72 323 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 ELOVL3Q9HB03 270 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 CRLF2Q9HC73 371 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 PNRC2Q9NPJ4 139 aaKnown RBP8.35□□□□□ -1.07
VTA1-201ENST00000367621 TRIM36Q9NQ86 728 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 SLC7A10Q9NS82 523 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 EMC3Q9P0I2 261 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 GNG8Q9UK08 70 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
VTA1-201ENST00000367621 PNMA8CA0A1B0GUJ8 204 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CD8B2A6NJW9 211 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 AHRRA9YTQ3 701 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 AIREO43918 545 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 MRPL33O75394 65 aaKnown RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 SC5DO75845 299 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 FREM3P0C091 2139 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CD53P19397 219 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 AGTR1P30556 359 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 GABRA5P31644 462 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 GBX2P52951 348 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 FOXG1P55316 489 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 TAS2R43P59537 309 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 RPS11P62280 158 aaKnown RBP eCLIP8.34□□□□□ -1.07
VTA1-201ENST00000367621 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 MRPS34P82930 218 aaKnown RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 FABP5Q01469 135 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 INSL4Q14641 139 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CDK5R1Q15078 307 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 STK11Q15831 433 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 SGCAQ16586 387 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 KRTCAP3Q53RY4 240 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 PRR30Q53SZ7 412 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 FAM27BQ5VT28 67 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 RPL22L1Q6P5R6 122 aaKnown RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 LRRN1Q6UXK5 716 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CFAP77Q6ZQR2 320 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 DCXRQ7Z4W1 244 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 PRSS35Q8N3Z0 413 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 OR52N5Q8NH56 324 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 RGP1Q92546 391 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 TMEM203Q969S6 136 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 GMPPAQ96IJ6 420 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 ALKBH3Q96Q83 286 aaPredicted RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 TRIB1Q96RU8 372 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 SLX1AQ9BQ83 275 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 CHCHD6Q9BRQ6 235 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 ZNF416Q9BWM5 594 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 RBM24Q9BX46 236 aaKnown RBP8.34□□□□□ -1.07
VTA1-201ENST00000367621 PRRG4Q9BZD6 226 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 TMEM38BQ9NVV0 291 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 PARPBPQ9NWS1 579 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 STUB1Q9UNE7 303 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 ZNF407Q9C0G0 2248 aa8.34□□□□□ -1.07
VTA1-201ENST00000367621 TRDV1A0A1B0GX56 115 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 TMEM8BA6NDV4 472 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 OR4C45A6NMZ5 311 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 SLC22A1O15245 554 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 RER1O15258 196 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 PNPP00491 289 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 IGHV3-9P01782 118 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 KRT8P05787 483 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 FCGR2AP12318 317 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 ZNF182P17025 639 aaPredicted RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 MSR1P21757 451 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 ANOS1P23352 680 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 UGT2B10P36537 528 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 KIR2DL2P43627 348 aaPredicted RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 KIR3DL2P43630 455 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 OR3A2P47893 321 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 ROR2Q01974 943 aaKnown RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 RSPO1Q2MKA7 263 aaPredicted RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 CEACAM16Q2WEN9 425 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 CCDC92Q53HC0 331 aaPredicted RBP8.33□□□□□ -1.08
VTA1-201ENST00000367621 ARL9Q6T311 187 aa8.33□□□□□ -1.08
VTA1-201ENST00000367621 PCSK4Q6UW60 755 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms