RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CSO75390 466 aaKnown RBP8.32□□□□□ -1.08
CALD1-202ENST00000361901 EPPINO95925 133 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
CALD1-202ENST00000361901 SEC61A1P61619 476 aaKnown RBP8.32□□□□□ -1.08
CALD1-202ENST00000361901 DCAF12Q5T6F0 453 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 QSOX2Q6ZRP7 698 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 ZNF440Q8IYI8 595 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 PUSL1Q8N0Z8 303 aaKnown RBP8.32□□□□□ -1.08
CALD1-202ENST00000361901 SLC38A9Q8NBW4 561 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 OR56B4Q8NH76 319 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 GPR119Q8TDV5 335 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 WNT2BQ93097 391 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 ZNF501Q96CX3 271 aaPredicted RBP8.32□□□□□ -1.08
CALD1-202ENST00000361901 OR5B2Q96R09 309 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 WWTR1Q9GZV5 400 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 PIGMQ9H3S5 423 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 TRIM36Q9NQ86 728 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 PADI1Q9ULC6 663 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
CALD1-202ENST00000361901 BLACEA4D250 179 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 CBY3A6NI87 242 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 SOX15O60248 233 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 UBCP0CG48 685 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 ZNF823P16415 610 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 HNF1AP20823 631 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ITGA3P26006 1051 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 PITPNAQ00169 270 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 MELKQ14680 651 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 HLXQ14774 488 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 TOMM34Q15785 309 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 AADACL4Q5VUY2 407 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 METAP1DQ6UB28 335 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 MORN4Q8NDC4 146 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 SAP25Q8TEE9 199 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 TM9SF4Q92544 642 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ZNF160Q9HCG1 818 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 DNAJB12Q9NXW2 375 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 KCND3Q9UK17 655 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 VSTM2BA6NLU5 285 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 TP53I11O14683 189 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 MT-ND5P03915 603 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 HIST1H1CP16403 213 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 SQSTM1Q13501 440 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 RPTNQ6XPR3 784 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 WDR88Q6ZMY6 472 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 RABEPKQ7Z6M1 372 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ZNF676Q8N7Q3 588 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 MRPS24Q96EL2 167 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 CNOT2Q9NZN8 540 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 MEIKINA0A087WXM9 373 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 A8MXK9 166 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 SUSD5O60279 629 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 FADS1O60427 444 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 PNMTP11086 282 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ANXA7P20073 488 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 SOX18P35713 384 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ZNF136P52737 540 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 CEBPGP53567 150 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 SLC37A1P57057 533 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 CBFBQ13951 182 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 GUCA2BQ16661 112 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 C1QL3Q5VWW1 255 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 MEPCEQ7L2J0 689 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 RNF113BQ8IZP6 322 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 OR1N1Q8NGS0 311 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 TSEN15Q8WW01 171 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 GCDHQ92947 438 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 C4orf36Q96KX1 117 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 KLF2Q9Y5W3 355 aaPredicted RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 FGF2P09038 288 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 UBBP0CG47 229 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 PAX6P26367 422 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 TLE3Q04726 772 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 RAB40BQ12829 278 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 ST3GAL2Q16842 350 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 CPEB2Q7Z5Q1 589 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 CEACAM19Q7Z692 300 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 OR10D4PQ8NGN7 298 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 SYT4Q9H2B2 425 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 GAR1Q9NY12 217 aaKnown RBP8.31□□□□□ -1.08
CALD1-202ENST00000361901 DKKL1Q9UK85 242 aa8.31□□□□□ -1.08
CALD1-202ENST00000361901 PCNX2A6NKB5 2137 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 KIF26BQ2KJY2 2108 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 TMED7-TICAM2A0A0A6YYA0 188 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 TMEM82A0PJX8 343 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 FZD7O75084 574 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 RECKO95980 971 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 PMP2P02689 132 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 GIMD1P0DJR0 217 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 LAMA1P25391 3075 aa8.3□□□□□ -1.08
CALD1-202ENST00000361901 LUMP51884 338 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms