RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SEC61A2Q9H9S3 476 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 FRRS1LQ9P0K9 344 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 GRIP1Q9Y3R0 1128 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF175Q9Y473 711 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 R4GMQ9 66 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 MED13Q9UHV7 2174 aa11.95□□□□□ -0.5
CCDC197-201ENST00000359253 ACOD1A6NK06 481 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 OR4C45A6NMZ5 311 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 VGLL3A8MV65 326 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 PRR32B1ATL7 298 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 H0YC42 278 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 TFECO14948 347 aaPredicted RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 MAGEB4O15481 346 aaPredicted RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 RPP14O95059 124 aaKnown RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 MPZL1O95297 269 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 APOC1P02654 83 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 CELA3AP09093 270 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 H2BFMP0C1H6 154 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 FCGR2AP12318 317 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF24P17028 368 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 MSR1P21757 451 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 CALRP27797 417 aaKnown RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 CD40LGP29965 261 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 PSMB10P40306 273 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 RFC3P40938 356 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 OPRL1P41146 370 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 MMP16P51512 607 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 PSMD7P51665 324 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 Q499Y3 187 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 SYT9Q86SS6 491 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 WDFY1Q8IWB7 410 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 GPR137CQ8N3F9 429 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 GPR148Q8TDV2 347 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 ROBO4Q8WZ75 1007 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 C4orf45Q96LM5 186 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 WDFY2Q96P53 400 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 TTTY10Q9BZA0 68 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 C6orf62Q9GZU0 229 aaPredicted RBP11.94□□□□□ -0.5
CCDC197-201ENST00000359253 SLITRK2Q9H156 845 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 GLRX2Q9NS18 164 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 B3GNT3Q9Y2A9 372 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 UGT2A1Q9Y4X1 527 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
CCDC197-201ENST00000359253 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 TRBV5-5A0A0J9YX44 114 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF878C9JN71 531 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 AQP7O14520 342 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 MRPL33O75394 65 aaKnown RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ZFPL1O95159 310 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ISG15P05161 165 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 KLK2P20151 261 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 CTSSP25774 331 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 SELENOPP49908 381 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 NANOS3P60323 173 aaKnown RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 RPS11P62280 158 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 HNRNPA0Q13151 305 aaKnown RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 LY6DQ14210 128 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 SF3B4Q15427 424 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 HSD17B12Q53GQ0 312 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 FAM27BQ5VT28 67 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 LRRN1Q6UXK5 716 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 CATSPERDQ86XM0 798 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 MCEMP1Q8IX19 187 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ZNF676Q8N7Q3 588 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 SLAMF6Q96DU3 332 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 CEP19Q96LK0 163 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 AMELYQ99218 206 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 MRI1Q9BV20 369 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 BARHL1Q9BZE3 327 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ZCCHC4Q9H5U6 513 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 SMURF1Q9HCE7 757 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 GDF2Q9UK05 429 aaPredicted RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 NOSIPQ9Y314 301 aaKnown RBP11.93□□□□□ -0.5
CCDC197-201ENST00000359253 LRP12Q9Y561 859 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
CCDC197-201ENST00000359253 KIAA1549Q9HCM3 1950 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 LOC110117498-PIK3R3F6TDL0 507 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 RPL36A-HNRNPH2H7BZ11 118 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PSMD9O00233 223 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 YES1P07947 543 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 UBCP0CG48 685 aaKnown RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PSKH1P11801 424 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 RPS27P42677 84 aaKnown RBP11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PPP5CP53041 499 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 PCBD1P61457 104 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 HIST1H3AP68431 136 aa11.92□□□□□ -0.5
CCDC197-201ENST00000359253 SRYQ05066 204 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms