RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TRBV5-5A0A0J9YX44 114 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 F5H5P2 479 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ARPC3O15145 178 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 NKX2-2O95096 273 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ZFPL1O95159 310 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 MELTFP08582 738 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ADRA2CP18825 462 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 RAB3AP20336 220 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 FAUP35544 74 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 DLSTP36957 453 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 NR0B1P51843 470 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 GLB1L2Q8IW92 636 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR2Y1Q8NGV0 311 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 OR6N1Q8NGY5 312 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 GRHL3Q8TE85 626 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 SLC46A1Q96NT5 459 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 SMAD5Q99717 465 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 ALX4Q9H161 411 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 TAS2R8Q9NYW2 309 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 FBXL2Q9UKC9 423 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
RTFDC1-202ENST00000357348 LOC101059948A0A1B0GTJ6 334 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 SYNDIG1LA6NDD5 238 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 POM121CA8CG34 1229 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 XRCC3O43542 346 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 MTRF1O75570 445 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 PTHLHP12272 177 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF35P13682 527 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 GALNSP34059 522 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 CLDN12P56749 244 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 LINC01590Q5TEZ4 76 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 IL22RA1Q8N6P7 574 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 APCDD1LQ8NCL9 501 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 MARC2Q969Z3 335 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 LMF2Q9BU23 707 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 TRIM2Q9C040 744 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 C1orf198Q9H425 327 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 Q9N2J8 555 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 PRODH2Q9UF12 536 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 NXT1Q9UKK6 140 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 FARSAQ9Y285 508 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 IER3IP1Q9Y5U9 82 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 PRR32B1ATL7 298 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 MCIDASD6RGH6 385 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 EIF4E2O60573 245 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 RAD1O60671 282 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ADAM11O75078 769 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 SPI1P17947 270 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 SPINK2P20155 84 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 GMFBP60983 142 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF169Q14929 603 aaPredicted RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 EBPQ15125 230 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ZMYND11Q15326 602 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 Q499Y3 187 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 HLA-DQA1Q5Y7H0 255 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ATRAIDQ6UW56 229 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 TMEM205Q6UW68 189 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 ZNF433Q8N7K0 673 aaPredicted RBP11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 OR5T2Q8NGG2 359 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 CYB5R1Q9UHQ9 305 aa11.39□□□□□ -0.59
RTFDC1-202ENST00000357348 TRBV11-1A0A0K0K1C0 115 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 RFPL4AA6NLU0 287 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 RFPL4AL1F8VTS6 287 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 RBBP9O75884 186 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 SIX6O95475 246 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 CSF1P09603 554 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 H2AFB1P0C5Y9 115 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 PRKACAP17612 351 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 MST1P26927 711 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 GPR143P51810 404 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 KIRREL2Q6UWL6 708 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 SLC29A4Q7RTT9 530 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 BCORP1Q8N888 145 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 NFAM1Q8NET5 270 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 OR51L1Q8NGJ5 315 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 GINS4Q9BRT9 223 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 WWTR1Q9GZV5 400 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 BARX1Q9HBU1 254 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 DNAJB12Q9NXW2 375 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 C19orf25Q9UFG5 118 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 IL17BQ9UHF5 180 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 CNTRLQ7Z7A1 2325 aa11.38□□□□□ -0.59
RTFDC1-202ENST00000357348 FXYD6-FXYD2A0A087WZ82 144 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TRBV5-7A0A0A0MS05 114 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 TMEM272A0A1B0GTI8 110 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 UPK3AO75631 287 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 GLCEO94923 617 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 MAGEB1P43366 347 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 SLC26A5P58743 744 aa11.37□□□□□ -0.59
RTFDC1-202ENST00000357348 RNF4P78317 190 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms