RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HIST1H1CP16403 213 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 AADACP22760 399 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 RPS10P46783 165 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ACKR1Q16570 336 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 KANSL1Q7Z3B3 1105 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR1S2Q8NGQ3 325 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 FAM213BQ8TBF2 198 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 DCLRE1CQ96SD1 692 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 SLC17A4Q9Y2C5 497 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 POLDIP2Q9Y2S7 368 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TIMM10BQ9Y5J6 103 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 NRXN2Q9P2S2 1712 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 IGLV3-16A0A075B6K0 115 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TFAP2EQ6VUC0 442 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OPALINQ96PE5 141 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR51B6Q9H340 312 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 SMCO4Q9NRQ5 59 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 FRG2CA6NGY1 282 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 UPK1AO00322 258 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 GLAP06280 429 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PRKACAP17612 351 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ADRA2CP18825 462 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR1D5P58170 312 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 EBPQ15125 230 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TOMM34Q15785 309 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 SMAD2Q15796 467 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PAN3Q58A45 887 aaKnown RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 TRIM61Q5EBN2 209 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 FAM122CQ6P4D5 195 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 ZNF808Q8N4W9 903 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-202ENST00000357250 OR51S1Q8NGJ8 323 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 KCNE4Q8WWG9 221 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 RTL8AQ9BWD3 113 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
COL9A1-202ENST00000357250 IFITM5A6NNB3 132 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 IDSB3KWA1 339 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 M0QYG6 137 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 JTBO76095 146 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 OGFOD3Q6PK18 319 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 TMUB2Q71RG4 321 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 ELF4Q99607 663 aaPredicted RBP10.71□□□□□ -0.69
COL9A1-202ENST00000357250 IKZF5Q9H5V7 419 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 ASXL3Q9C0F0 2248 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 LAP3P28838 519 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 FAM71CQ8NEG0 241 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 OR51A4Q8NGJ6 313 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 OR5D18Q8NGL1 313 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 OR13C8Q8NGS7 320 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 C6orf106Q9H6K1 298 aaPredicted RBP10.71□□□□□ -0.69
COL9A1-202ENST00000357250 CALHM2Q9HA72 323 aa10.71□□□□□ -0.69
COL9A1-202ENST00000357250 YARS2Q9Y2Z4 477 aaKnown RBP10.71□□□□□ -0.69
COL9A1-202ENST00000357250 POM121BA6NF01 834 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 CLDN1O95832 211 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 HLA-HP01893 362 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 RPS2P15880 293 aaKnown RBP10.71□□□□□ -0.7
COL9A1-202ENST00000357250 BTN1A1Q13410 526 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 OR52I2Q8NH67 350 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 OIT3Q8WWZ8 545 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 YIPF5Q969M3 257 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 OXGR1Q96P68 337 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF346Q9UL40 294 aaKnown RBP10.71□□□□□ -0.7
COL9A1-202ENST00000357250 RNF150Q9ULK6 438 aa10.71□□□□□ -0.7
COL9A1-202ENST00000357250 A0A1B0GUH1 482 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 A0A1W2PPC4 97 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 LRRC30A6NM36 301 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 ZNF732B4DXR9 585 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 LINC01565O15544 149 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 XRCC2O43543 280 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 AKR7A3O95154 331 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 DUSP1P28562 367 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 TCTN1Q2MV58 587 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 EMG1Q92979 244 aaKnown RBP10.7□□□□□ -0.7
COL9A1-202ENST00000357250 SAMD10Q9BYL1 202 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 OR11A1Q9GZK7 315 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 RIMS4Q9H426 269 aaPredicted RBP10.7□□□□□ -0.7
COL9A1-202ENST00000357250 SLAMF7Q9NQ25 335 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 PRSS37A4D1T9 235 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 CEACAM5P06731 702 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 ARR3P36575 388 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 MRPS34P82930 218 aaKnown RBP10.7□□□□□ -0.7
COL9A1-202ENST00000357250 RPL18Q07020 188 aaKnown RBP10.7□□□□□ -0.7
COL9A1-202ENST00000357250 LHFPL2Q6ZUX7 228 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 GDPD3Q7L5L3 318 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 ZFP82Q8N141 532 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 GABRG1Q8N1C3 465 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 GNPNAT1Q96EK6 184 aaPredicted RBP10.7□□□□□ -0.7
COL9A1-202ENST00000357250 MED30Q96HR3 178 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 CDCP1Q9H5V8 836 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 HDGFL3Q9Y3E1 203 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 R4GMQ9 66 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 SPTA1P02549 2419 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 PMP2P02689 132 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 ST6GAL1P15907 406 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 CLDN20P56880 219 aa10.7□□□□□ -0.7
COL9A1-202ENST00000357250 DBPQ10586 325 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms