RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 OTUB2Q96DC9 234 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 SLC2A4RGQ9NR83 387 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 GLRX2Q9NS18 164 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 ZNF281Q9Y2X9 895 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 V9GYS6 101 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 ZNF727A8MUV8 499 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 TRDCB7Z8K6 153 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 HNF1AP20823 631 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 TEAD1P28347 426 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 MC3RP41968 323 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 ERVFRD-1P60508 538 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 HAGHQ16775 308 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 MIDNQ504T8 468 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 PRSS54Q6PEW0 395 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 DEGS2Q6QHC5 323 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 SLC16A14Q7RTX9 510 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 TMEM255BQ8WV15 326 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 RCC1LQ96I51 464 aaKnown RBP14.22□□□□□ -0.13
RTN3-205ENST00000356000 DIRC2Q96SL1 478 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 CDX2Q99626 313 aaPredicted RBP14.22□□□□□ -0.13
RTN3-205ENST00000356000 DMRT3Q9NQL9 472 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 IL36AQ9UHA7 158 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 TBX21Q9UL17 535 aa14.22□□□□□ -0.13
RTN3-205ENST00000356000 PCYT1BQ9Y5K3 369 aaPredicted RBP14.22□□□□□ -0.13
RTN3-205ENST00000356000 C13orf42A0A1B0GVH6 325 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 UNC119BA6NIH7 251 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 H3BRB1 525 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 CYB5BO43169 146 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 TGOLN2O43493 480 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 TCF21O43680 179 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 AMBPP02760 352 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 THY1P04216 161 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 APODP05090 189 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 TBPP20226 339 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 FCARP24071 287 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 TLE4Q04727 773 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 HSPB3Q12988 150 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 NCR3LG1Q68D85 454 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 ULK3Q6PHR2 472 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 AGTRAPQ6RW13 159 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 KCTD9Q7L273 389 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 GRASPQ7Z6J2 395 aaPredicted RBP14.21□□□□□ -0.13
RTN3-205ENST00000356000 TMPRSS12Q86WS5 348 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 KLHDC8AQ8IYD2 350 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 SEMA6DQ8NFY4 1073 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 SUN3Q8TAQ9 357 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 OR2AG1Q9H205 316 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 GPR55Q9Y2T6 319 aaPredicted RBP14.21□□□□□ -0.13
RTN3-205ENST00000356000 DOCK6Q96HP0 2047 aa14.21□□□□□ -0.13
RTN3-205ENST00000356000 TGIF2-C20orf24A0A0A6YYL0 155 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 RAMP1O60894 148 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 CHATP28329 748 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 PSMB10P40306 273 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 AFF3P51826 1226 aaKnown RBP14.21□□□□□ -0.14
RTN3-205ENST00000356000 EFNB2P52799 333 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 TAS2R38P59533 333 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 B4GALNT1Q00973 533 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 SLCO4C1Q6ZQN7 724 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 TMEM173Q86WV6 379 aaPredicted RBP14.21□□□□□ -0.14
RTN3-205ENST00000356000 TMEM183AQ8IXX5 376 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 OR1N1Q8NGS0 311 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 G6PC3Q9BUM1 346 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 LPAR2Q9HBW0 351 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 ZDHHC3Q9NYG2 299 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 SEMA5BQ9P283 1151 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 GNG8Q9UK08 70 aa14.21□□□□□ -0.14
RTN3-205ENST00000356000 PUS1Q9Y606 427 aaKnown RBP eCLIP14.21□□□□□ -0.14
RTN3-205ENST00000356000 FAM171A2A8MVW0 826 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 B4E171 279 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 NXPH2O95156 264 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 TACR2P21452 398 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 AKT2P31751 481 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 SGCGQ13326 291 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 EXOSC6Q5RKV6 272 aaKnown RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 FAHD2BQ6P2I3 314 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 FAHD2AQ96GK7 314 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 SLC35G5Q96KT7 338 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 JSRP1Q96MG2 331 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 TCEAL2Q9H3H9 227 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 GSX1Q9H4S2 264 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 MYOTQ9UBF9 498 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 TRPC4Q9UBN4 977 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 SUSD2Q9UGT4 822 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 CD84Q9UIB8 345 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 SH2B3Q9UQQ2 575 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 RRP8O43159 456 aaKnown RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 ZNF354AO60765 605 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 TBX18O95935 607 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 CSTBP04080 98 aaKnown RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 GALTP07902 379 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 OR5AC1P0C628 307 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 OR2T7P0C7T2 308 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 ELFN1P0C7U0 828 aa14.2□□□□□ -0.14
RTN3-205ENST00000356000 TLX1P31314 330 aaPredicted RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 SUCLG1P53597 346 aaKnown RBP14.2□□□□□ -0.14
RTN3-205ENST00000356000 CARD18P57730 90 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms