RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TM9SF2Q99805 663 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 EMC9Q9Y3B6 208 aa13.74□□□□□ -0.21
CTSA-202ENST00000354880 ACACBO00763 2458 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 ARHGAP21Q5T5U3 1957 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 RP1L1Q8IWN7 2480 aaPredicted RBP13.73□□□□□ -0.21
CTSA-202ENST00000354880 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 SLC22A1O15245 554 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 WNT11O96014 354 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 CD53P19397 219 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 CRYBB2P43320 205 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 RIDAP52758 137 aaKnown RBP13.73□□□□□ -0.21
CTSA-202ENST00000354880 VBP1P61758 197 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 RPS25P62851 125 aaKnown RBP13.73□□□□□ -0.21
CTSA-202ENST00000354880 AQP6Q13520 282 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
CTSA-202ENST00000354880 FAM27BQ5VT28 67 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 GDPGP1Q6ZNW5 385 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 LRRC18Q8N456 261 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 SLAMF6Q96DU3 332 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 EXOSC4Q9NPD3 245 aaKnown RBP13.73□□□□□ -0.21
CTSA-202ENST00000354880 ASF1BQ9NVP2 202 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 LRP12Q9Y561 859 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 PKD1L2Q7Z442 2459 aa13.73□□□□□ -0.21
CTSA-202ENST00000354880 TRBV2A0A0J9YWF9 115 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 MBD3L4A6NDZ8 208 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 MBD3L3A6NE82 208 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 MBD3L5A6NJ08 208 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 ZNF254O75437 659 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 GPX5O75715 221 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 SFTPCP11686 197 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 B4GALT1P15291 398 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 OR3A2P47893 321 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 NCS1P62166 190 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 OR7E24Q6IFN5 339 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 RHOUQ7L0Q8 258 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 MBD3L2Q8NHZ7 208 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
CTSA-202ENST00000354880 PGLYRP3Q96LB9 341 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 TMED9Q9BVK6 235 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 CENPMQ9NSP4 180 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 SSR3Q9UNL2 185 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 ZGRF1Q86YA3 2104 aa13.72□□□□□ -0.21
CTSA-202ENST00000354880 RER1O15258 196 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 HLA-DPB1P04440 258 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 OPRL1P41146 370 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 FAPQ12884 760 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 SPCS2Q15005 226 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 NRN1LQ496H8 165 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.21
CTSA-202ENST00000354880 FBXW9Q5XUX1 488 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 RTL6Q6ICC9 239 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 ABHD12BQ7Z5M8 362 aaPredicted RBP13.71□□□□□ -0.21
CTSA-202ENST00000354880 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.71□□□□□ -0.21
CTSA-202ENST00000354880 SLC22A24Q8N4F4 322 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 GJC3Q8NFK1 279 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 OR10S1Q8NGN2 331 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 HSD17B8Q92506 261 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 MALT1Q9UDY8 824 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 PRSS50Q9UI38 385 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 ATRXP46100 2492 aa13.71□□□□□ -0.21
CTSA-202ENST00000354880 A0A1W2PPW3 197 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 ZNF878C9JN71 531 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 CD1AP06126 327 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 HOXD4P09016 255 aaPredicted RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 CST2P09228 141 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 PCSK6P29122 969 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 TGFBR1P36897 503 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 KIR2DL2P43627 348 aaPredicted RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 GDI2P50395 445 aaKnown RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 FABP5Q01469 135 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 NFATC3Q12968 1075 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 ALKBH1Q13686 389 aaKnown RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 C1orf185Q5T7R7 199 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 GFRALQ6UXV0 394 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 SEM1Q6ZVN7 128 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 RPS4Y2Q8TD47 263 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 GHSRQ92847 366 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 FBXO17Q96EF6 278 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 TRMT61AQ96FX7 289 aaKnown RBP13.71□□□□□ -0.22
CTSA-202ENST00000354880 COQ7Q99807 217 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 SH3GL3Q99963 347 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 FAM215AQ9Y5M1 114 aa13.71□□□□□ -0.22
CTSA-202ENST00000354880 PRRG2O14669 202 aa13.7□□□□□ -0.22
CTSA-202ENST00000354880 FARS2O95363 451 aaKnown RBP13.7□□□□□ -0.22
CTSA-202ENST00000354880 PER3P56645 1201 aa13.7□□□□□ -0.22
CTSA-202ENST00000354880 ARF1P84077 181 aaKnown RBP13.7□□□□□ -0.22
CTSA-202ENST00000354880 TRAM1Q15629 374 aa13.7□□□□□ -0.22
CTSA-202ENST00000354880 C9orf135Q5VTT2 229 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms