RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ARL5BQ96KC2 179 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC6A7Q99884 636 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 MSRAQ9UJ68 235 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 ATXN7L1Q9ULK2 861 aaPredicted RBP16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 RTTNQ86VV8 2226 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 MED12Q93074 2177 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 ALG1L2C9J202 215 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 PHYHO14832 338 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 NPIPB7O75200 414 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 DXOO77932 396 aaKnown RBP16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 GALNSP34059 522 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC6A8P48029 635 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 ROM1Q03395 351 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 GK2Q14410 553 aaPredicted RBP16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 GVQW1Q8N7I0 195 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 MED11Q9P086 117 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 KLK13Q9UKR3 277 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 KCNAB3O43448 404 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ZNF735P0CB33 412 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ZP3P21754 424 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 PTGS2P35354 604 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ARHGDIBP52566 201 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 SCAND1P57086 179 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 TAGLNQ01995 201 aaKnown RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ATPAF1Q5TC12 328 aaPredicted RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 GLT8D1Q68CQ7 371 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 DCXRQ7Z4W1 244 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 C12orf45Q8N5I9 185 aaPredicted RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 OR13C3Q8NGS6 347 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 FAM46BQ96A09 425 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 PELOQ9BRX2 385 aaKnown RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 CENPMQ9NSP4 180 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 SHISA8B8ZZ34 492 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 H3BMH7 237 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 P2RY10O00398 339 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 IGFBP3P17936 291 aaPredicted RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 PGCP20142 388 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 EIF1AXP47813 144 aaKnown RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 OR1D5P58170 312 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 PMPCAQ10713 525 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ATXN7L3Q14CW9 347 aaPredicted RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ASB17Q8WXJ9 295 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 WWTR1Q9GZV5 400 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 PPA2Q9H2U2 334 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 MED29Q9NX70 200 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 VSX1Q9NZR4 365 aaPredicted RBP16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 MKL2Q9ULH7 1088 aa16.21■□□□□ 0.19
PTP4A3-202ENST00000349124 ABCA7Q8IZY2 2146 aa16.21■□□□□ 0.18
PTP4A3-202ENST00000349124 TLCD2A6NGC4 264 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 TUBAL3A6NHL2 446 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF354AO60765 605 aaPredicted RBP16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 DNASE1L1P49184 302 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 KCTD18Q6PI47 426 aaPredicted RBP16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ATRAIDQ6UW56 229 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 RNF144BQ7Z419 303 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF546Q86UE3 836 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ZNF454Q8N9F8 522 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 STEAP2Q8NFT2 490 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 OR13C8Q8NGS7 320 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 OR52N5Q8NH56 324 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 OR1L3Q8NH93 324 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ST8SIA4Q92187 359 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 SHARPINQ9H0F6 387 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 CKLFQ9UBR5 152 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 MRTO4Q9UKD2 239 aaKnown RBP16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 LOC107986453A0A1B0GWG9 222 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 A8MXK9 166 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 TAS2R19P59542 299 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 ELOCQ15369 112 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 OR52W1Q6IF63 320 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 BPIFB2Q8N4F0 458 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 MICU1Q9BPX6 476 aa16.2■□□□□ 0.18
PTP4A3-202ENST00000349124 TMEM131Q92545 1883 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 C2CD4DB7Z1M9 353 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 TPPPO94811 219 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 OPN1LWP04000 364 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 CD2P06729 351 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 FOLR1P15328 257 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 MPGP29372 298 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 ARRB1P49407 418 aaPredicted RBP16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 GMFBP60983 142 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 CFHR1Q03591 330 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 ELAVL1Q15717 326 aaKnown RBP16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 CDH26Q8IXH8 852 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 BOLLQ8N9W6 283 aaKnown RBP16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 OR5M9Q8NGP3 310 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 EMC6Q9BV81 110 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 C8orf33Q9H7E9 229 aaPredicted RBP16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 C12orf10Q9HB07 376 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 G6PC2Q9NQR9 355 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 PFDN2Q9UHV9 154 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 VPS13AQ96RL7 3174 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 A8MVM7 634 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 CFPP27918 469 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 POLR2HP52434 150 aaKnown RBP16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 DHRS2Q13268 280 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 HDDC2Q7Z4H3 204 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 BEST3Q8N1M1 668 aa16.19■□□□□ 0.18
PTP4A3-202ENST00000349124 C1orf198Q9H425 327 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms