RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MALT1Q9UDY8 824 aa12□□□□□ -0.49
CDC42-202ENST00000344548 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
CDC42-202ENST00000344548 B3GNT3Q9Y2A9 372 aa12□□□□□ -0.49
CDC42-202ENST00000344548 KLF13Q9Y2Y9 288 aaPredicted RBP12□□□□□ -0.49
CDC42-202ENST00000344548 TNRC6AQ8NDV7 1962 aaKnown RBP12□□□□□ -0.49
CDC42-202ENST00000344548 CEP295Q9C0D2 2601 aa12□□□□□ -0.49
CDC42-202ENST00000344548 UPK1BO75841 260 aa12□□□□□ -0.49
CDC42-202ENST00000344548 GATBO75879 557 aaKnown RBP12□□□□□ -0.49
CDC42-202ENST00000344548 OCM2P0CE71 109 aa12□□□□□ -0.49
CDC42-202ENST00000344548 ADRA2CP18825 462 aa12□□□□□ -0.49
CDC42-202ENST00000344548 RAB3BP20337 219 aa12□□□□□ -0.49
CDC42-202ENST00000344548 MYL9P24844 172 aa12□□□□□ -0.49
CDC42-202ENST00000344548 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
CDC42-202ENST00000344548 NHLH1Q02575 133 aa12□□□□□ -0.49
CDC42-202ENST00000344548 BAK1Q16611 211 aa12□□□□□ -0.49
CDC42-202ENST00000344548 HSD17B12Q53GQ0 312 aa12□□□□□ -0.49
CDC42-202ENST00000344548 ABLIM2Q6H8Q1 611 aa12□□□□□ -0.49
CDC42-202ENST00000344548 LYSMD2Q8IV50 215 aa12□□□□□ -0.49
CDC42-202ENST00000344548 OR5H6Q8NGV6 325 aa12□□□□□ -0.49
CDC42-202ENST00000344548 NABP1Q96AH0 204 aa12□□□□□ -0.49
CDC42-202ENST00000344548 DIRAS2Q96HU8 199 aa12□□□□□ -0.49
CDC42-202ENST00000344548 NKX3-1Q99801 234 aaPredicted RBP12□□□□□ -0.49
CDC42-202ENST00000344548 PNRC2Q9NPJ4 139 aaKnown RBP12□□□□□ -0.49
CDC42-202ENST00000344548 G6PC2Q9NQR9 355 aa12□□□□□ -0.49
CDC42-202ENST00000344548 B4GALT7Q9UBV7 327 aa12□□□□□ -0.49
CDC42-202ENST00000344548 APC2O95996 2303 aa12□□□□□ -0.49
CDC42-202ENST00000344548 TRAV1-2A0A0B4J238 106 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 LMX1BO60663 402 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 CD46P15529 392 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ZNF708P17019 499 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 P2RY14Q15391 338 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 SGCAQ16586 387 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 Q499Y3 187 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ASB18Q6ZVZ8 466 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 CATSPERDQ86XM0 798 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 CENPSQ8N2Z9 138 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 DNAAF1Q8NEP3 725 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 OR10H5Q8NGA6 315 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ZNF416Q9BWM5 594 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 TIGARQ9NQ88 270 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ATMQ13315 3056 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 C5orf63A6NC05 138 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 KLRC4-KLRK1H3BQV0 150 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 DNPH1O43598 174 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 EPXP11678 715 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ELK1P19419 428 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 PSMD7P51665 324 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 RSPO4Q2I0M5 234 aaPredicted RBP11.99□□□□□ -0.49
CDC42-202ENST00000344548 HYAL4Q2M3T9 481 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 DDI2Q5TDH0 399 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 DCDC5Q6ZRR9 648 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 FCRLAQ7L513 359 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 TPRA1Q86W33 373 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 C20orf196Q8IYI0 205 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 LRRC18Q8N456 261 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 TMEM106AQ96A25 262 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 ALKBH3Q96Q83 286 aaPredicted RBP11.99□□□□□ -0.49
CDC42-202ENST00000344548 SF3B5Q9BWJ5 86 aaKnown RBP11.99□□□□□ -0.49
CDC42-202ENST00000344548 RBM24Q9BX46 236 aaKnown RBP11.99□□□□□ -0.49
CDC42-202ENST00000344548 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
CDC42-202ENST00000344548 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 DHHO43323 396 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ZNF254O75437 659 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ARL6IP5O75915 188 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 IGHV3-9P01782 118 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 SNRPBP14678 240 aaKnown RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 ZNF133P52736 654 aaPredicted RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 RASGEF1BQ0VAM2 473 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ENDOGQ14249 297 aaKnown RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 C10orf128Q5T292 105 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 CNIH2Q6PI25 160 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 Q6ZNX1 250 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 FNDC9Q8TBE3 224 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 AP3S1Q92572 193 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ZNF319Q9P2F9 582 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 SPRR3Q9UBC9 169 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 CLEC4AQ9UMR7 237 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 R4GMQ9 66 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 TMEM269A0A1B0GVZ9 245 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 E9PLN8 166 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 TLX3O43711 291 aaPredicted RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 CYTIPO60759 359 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 EIF4EP06730 217 aaKnown RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 H2BFMP0C1H6 154 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 SLC2A1P11166 492 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 EVX1P49640 407 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 CCR9P51686 369 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 CLDN12P56749 244 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 KCNMB1Q16558 191 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 STAC2Q6ZMT1 411 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 NAA40Q86UY6 237 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ZNF433Q8N7K0 673 aaPredicted RBP11.98□□□□□ -0.49
CDC42-202ENST00000344548 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
CDC42-202ENST00000344548 ABTB1Q969K4 478 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms