RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 KDM4DQ6B0I6 523 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ZNF813Q6ZN06 617 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 THAP3Q8WTV1 239 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 EDAQ92838 391 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 IL22RA2Q969J5 263 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CITED1Q99966 193 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SPATC1LQ9H0A9 340 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 MARCH5Q9NX47 278 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SUSD2Q9UGT4 822 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PSORS1C1Q9UIG5 152 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CALCBP10092 127 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CRISP2P16562 243 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TACR2P21452 398 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 HTR1FP30939 366 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SLC6A11P48066 632 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SIRPAP78324 504 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 FAM3AP98173 230 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 UBE2V2Q15819 145 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SAPCD1Q5SSQ6 148 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PRAMEF19Q5SWL8 479 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 OR2D2Q9H210 308 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ADARB2Q9NS39 739 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 C1orf226A1L170 272 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 APODP05090 189 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 APLNRP35414 380 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SCNN1AP37088 669 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TNFSF9P41273 254 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SLC6A8P48029 635 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 GABRA6Q16445 453 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PHLDA2Q53GA4 152 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PIP5KL1Q5T9C9 394 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SEZ6L2Q6UXD5 910 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 OR14C36Q8NHC7 312 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ADAMTS18Q8TE60 1221 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 UCN3Q969E3 161 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ZNF300Q96RE9 604 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 GPR20Q99678 358 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PIMREGQ9BSJ6 248 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DPH1Q9BZG8 443 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 AKIP1Q9NQ31 210 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 INIPQ9NRY2 104 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CDC34P49427 236 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 SUCLG1P53597 346 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 ATP1B3P54709 279 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 OR1C1Q15619 314 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 LTB4RQ15722 352 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TAZQ16635 292 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 COX19Q49B96 90 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SLC46A3Q7Z3Q1 461 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RXFP4Q8TDU9 374 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DNAJA3Q96EY1 480 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RHOVQ96L33 236 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 ZFP37Q9Y6Q3 630 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 PRRC2CQ9Y520 2896 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 NSG1A0A0A6YYJ2 146 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RNF225M0QZC1 329 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 SNRPBP14678 240 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 ZNF93P35789 620 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 TBPL1P62380 186 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CCL15Q16663 113 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 FCRLBQ6BAA4 426 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TRILQ7L0X0 811 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 GDPD3Q7L5L3 318 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PLPPR4Q7Z2D5 763 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RPL10LQ96L21 214 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 DPH7Q9BTV6 452 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RSRP1Q9BUV0 290 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 HSD3B7Q9H2F3 369 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DNAJB11Q9UBS4 358 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 PEF1Q9UBV8 284 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 OR5K3A6NET4 321 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 LRRC3CA6NJW4 275 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CLDN34H7C241 214 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CDS2O95674 445 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 POU3F3P20264 500 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 PCSK6P29122 969 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 RAD52P43351 418 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 NKX2-1P43699 371 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 ERVS71-1P61550 626 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CTBSQ01459 385 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TMEM267Q0VDI3 215 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 PLPP4Q5VZY2 271 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 OTOP2Q7RTS6 562 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 NTMT1Q9BV86 223 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SELENOIQ9C0D9 397 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 NKX2-4Q9H2Z4 354 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TAS2R5Q9NYW4 299 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 NAGKQ9UJ70 344 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 DNAJC15Q9Y5T4 150 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 UBE2L5PA0A1B0GUS4 154 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 MCRIP1C9JLW8 97 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TSPAN12O95859 305 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 IGHG1P01857 330 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TYRP1P17643 537 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms