RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GDPD3Q7L5L3 318 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 LRRTM1Q86UE6 522 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.73■□□□□ 0.43
RTN1-202ENST00000342503 TMEM123Q8N131 208 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 OR4M1Q8NGD0 313 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 OR10S1Q8NGN2 331 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 TSEN15Q8WW01 171 aaKnown RBP17.73■□□□□ 0.43
RTN1-202ENST00000342503 SF3B5Q9BWJ5 86 aaKnown RBP17.73■□□□□ 0.43
RTN1-202ENST00000342503 C1orf198Q9H425 327 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 BRD7Q9NPI1 651 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 G6PC2Q9NQR9 355 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 B4GALT7Q9UBV7 327 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 POLR1DQ9Y2S0 133 aa17.73■□□□□ 0.43
RTN1-202ENST00000342503 RAF1P04049 648 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 HPNP05981 417 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 LIPCP11150 499 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 NR2C1P13056 603 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 BCAP31P51572 246 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 SRSF6Q13247 344 aaKnown RBP17.72■□□□□ 0.43
RTN1-202ENST00000342503 RIN1Q13671 783 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 TAB1Q15750 504 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 CFAP77Q6ZQR2 320 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 OR10D3Q8NH80 312 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 SETD6Q8TBK2 473 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 TMEM106AQ96A25 262 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 GDF2Q9UK05 429 aaPredicted RBP17.72■□□□□ 0.43
RTN1-202ENST00000342503 OR52A1Q9UKL2 312 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 V9GY05 133 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 TRAV8-7A0A075B6U6 113 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 FAM166BA8MTA8 275 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 SP1P08047 785 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 CELA3AP09093 270 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 ADRA2CP18825 462 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 SELENOPP49908 381 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 SCN1BQ07699 218 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 C11orf91Q3C1V1 193 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 DTX3Q8N9I9 347 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 MDS2Q8NDY4 140 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 OR2AJ1Q8NGZ0 328 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 ROBO4Q8WZ75 1007 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 TTTY12Q9BZ98 90 aa17.72■□□□□ 0.43
RTN1-202ENST00000342503 EP300Q09472 2414 aaPredicted RBP17.71■□□□□ 0.43
RTN1-202ENST00000342503 TMEM269A0A1B0GVZ9 245 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 IFITM5A6NNB3 132 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 DOK2O60496 412 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 TALDO1P37837 337 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 ZNF133P52736 654 aaPredicted RBP17.71■□□□□ 0.43
RTN1-202ENST00000342503 C10orf128Q5T292 105 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 AGAP7PQ5VUJ5 663 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 SLC25A25Q6KCM7 469 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 Q8N402 240 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 ZNF671Q8TAW3 534 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 SNRNP27Q8WVK2 155 aaKnown RBP17.71■□□□□ 0.43
RTN1-202ENST00000342503 THRSPQ92748 146 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 ZNF775Q96BV0 537 aaPredicted RBP17.71■□□□□ 0.43
RTN1-202ENST00000342503 AGAP4Q96P64 663 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.43
RTN1-202ENST00000342503 SPATA2Q9UM82 520 aa17.71■□□□□ 0.43
RTN1-202ENST00000342503 A0A0G2JMP0 313 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 A0A0X1KG70 313 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 A0A1B0GVC2 190 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 LINC00854A0A1B0GVQ3 168 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 OR5H15A6NDH6 313 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 A6NIN4 97 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 LINC01387J3KSC0 135 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 AIPO00170 330 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 NKX2-8O15522 239 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 SSX4O60224 188 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 NME2P1O60361 137 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 APOA1P02647 267 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 NME2P22392 152 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 SGCAQ16586 387 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 IGF2-ASQ6U949 168 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 OR4M2Q8NGB6 313 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 LGALS14Q8TCE9 139 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 PNPLA2Q96AD5 504 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 RHBDL2Q9NX52 303 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 ASH2LQ9UBL3 628 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 FOXD3Q9UJU5 478 aaPredicted RBP17.7■□□□□ 0.42
RTN1-202ENST00000342503 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 DHDHQ9UQ10 334 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 FLVCR1Q9Y5Y0 555 aa17.7■□□□□ 0.42
RTN1-202ENST00000342503 ZNF716A6NP11 495 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 MAS1P04201 325 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 PRKAR1AP10644 381 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 MAGEA5P43359 124 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 MEOX1P50221 254 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 RRADP55042 308 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 PLGLB1Q02325 96 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 ABLIM2Q6H8Q1 611 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 KLHL24Q6TFL4 600 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 GALNTL5Q7Z4T8 443 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 C20orf196Q8IYI0 205 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 TMEM251Q8N6I4 163 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 DNAAF1Q8NEP3 725 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 INTS12Q96CB8 462 aaKnown RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 FAM206AQ9NX38 181 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 KLF13Q9Y2Y9 288 aaPredicted RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 CEACAM1P13688 526 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 DCTDP32321 178 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms