RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 XRCC3O43542 346 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 WDPCPO95876 746 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 LCATP04180 440 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SULT1A3P0DMM9 295 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SULT1A4P0DMN0 295 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PEBP1P30086 187 aaKnown RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 FMODQ06828 376 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 RSU1Q15404 277 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF529Q6P280 563 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ASB17Q8WXJ9 295 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ATOH1Q92858 354 aaPredicted RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 MRPS28Q9Y2Q9 187 aaKnown RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 OTOFQ9HC10 1997 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 NBASA2RRP1 2371 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 A0A087WV62 115 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SGCEO43556 437 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ATG12O94817 140 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 RRASP10301 218 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 S100A2P29034 98 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PSG6Q00889 435 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 LPAL2Q16609 132 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ZNF425Q6IV72 752 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 FNDC9Q8TBE3 224 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 OR51E1Q8TCB6 317 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PIGTQ969N2 578 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 CCDC74AQ96AQ1 378 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 LMAN1LQ9HAT1 526 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SUSD2Q9UGT4 822 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PCDHGA5Q9Y5G8 931 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 CACNA1DQ01668 2161 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SULT2B1O00204 365 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 DUX1O43812 170 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 GLSO94925 669 aaPredicted RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ALOX5APP20292 161 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 S100GP29377 79 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 EFNB2P52799 333 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 RAB2AP61019 212 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 RPL27P61353 136 aaKnown RBP11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 HSD11B2P80365 405 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PEA15Q15121 130 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 EID2Q8N6I1 236 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 ARPC5LQ9BPX5 153 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 BIN3Q9NQY0 253 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 CES1P1Q9UKY3 287 aa11.26□□□□□ -0.61
SNRNP48-201ENST00000342415 LINC01565O15544 149 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 NSA2O95478 260 aaKnown RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TBX6O95947 436 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 JMJD7P0C870 316 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 RD3LP0DJH9 198 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 CD80P33681 288 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 FOXL2P58012 376 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 SHHQ15465 462 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 RNLSQ5VYX0 342 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 FCRL6Q6DN72 434 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 SLC22A8Q8TCC7 542 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 S100PBPQ96BU1 408 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 SULT4A1Q9BR01 284 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 JAM3Q9BX67 310 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 NKX2-2O95096 273 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TGM6O95932 706 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 GNMTQ14749 295 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 NR0B2Q15466 257 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 C9orf135Q5VTT2 229 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TMEM71Q6P5X7 295 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 C19orf48Q6RUI8 117 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 DGAT2L6Q6ZPD8 337 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 SULF2Q8IWU5 870 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 CDH26Q8IXH8 852 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 LSMEM1Q8N8F7 131 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 DDIT4LQ96D03 193 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 TCTN2Q96GX1 697 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 CRB3Q9BUF7 120 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 C1orf198Q9H425 327 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 MRPS18AQ9NVS2 196 aaKnown RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 FRRS1LQ9P0K9 344 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 MRM2Q9UI43 246 aaKnown RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 UBE2J1Q9Y385 318 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 MYLKQ15746 1914 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 FAM221BA6H8Z2 402 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 NXPH3O95157 252 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 THY1P04216 161 aa11.25□□□□□ -0.61
SNRNP48-201ENST00000342415 DAP3P51398 398 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms