RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LRRC18Q8N456 261 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 GHSRQ92847 366 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 SMIM19Q96E16 107 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 RNF122Q9H9V4 155 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 TXNL4BQ9NX01 149 aaKnown RBP15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CYB5R1Q9UHQ9 305 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 ST6GALNAC2Q9UJ37 374 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 UGT2A1Q9Y4X1 527 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 OR14I1A6ND48 311 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CD8B2A6NJW9 211 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 RGS9O75916 674 aaPredicted RBP15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CD8BP10966 210 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CD53P19397 219 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 NPR2P20594 1047 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 FABP5Q01469 135 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 PCK2Q16822 640 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CPT1CQ8TCG5 803 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 KCNN2Q9H2S1 579 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 PLSCR2Q9NRY7 297 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 GALNT8Q9NY28 637 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 GDF2Q9UK05 429 aaPredicted RBP15.31■□□□□ 0.04
CLDN4-201ENST00000340958 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
CLDN4-201ENST00000340958 TRDV1A0A1B0GX56 115 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 HSPB2A8KAH6 182 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 OGG1O15527 345 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 SERPINA3P01011 423 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 TGM4P49221 684 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF133P52736 654 aaPredicted RBP15.3■□□□□ 0.04
CLDN4-201ENST00000340958 LSM6P62312 80 aaKnown RBP15.3■□□□□ 0.04
CLDN4-201ENST00000340958 TUBA1BP68363 451 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 ROM1Q03395 351 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 SF3B4Q15427 424 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLDN4-201ENST00000340958 HSPB2Q16082 182 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 KCNMB1Q16558 191 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 DGUOKQ16854 277 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 CEACAM16Q2WEN9 425 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 RIPPLY2Q5TAB7 128 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 DMKNQ6E0U4 476 aaPredicted RBP15.3■□□□□ 0.04
CLDN4-201ENST00000340958 KLHL24Q6TFL4 600 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 TUBA1AQ71U36 451 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF843Q8N446 348 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 MS4A15Q8N5U1 240 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 SLAMF6Q96DU3 332 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 KCTD7Q96MP8 289 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 GPR137Q96N19 417 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 COQ7Q99807 217 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF416Q9BWM5 594 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 C12orf49Q9H741 205 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 GPR35Q9HC97 309 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 LRP12Q9Y561 859 aa15.3■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF587BE7ETH6 402 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 GABRPO00591 440 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ABHD16AO95870 558 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 UGT2B10P36537 528 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 TSPO2Q5TGU0 170 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ST7LQ8TDW4 575 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF837Q96EG3 531 aaPredicted RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 TRMT61AQ96FX7 289 aaKnown RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 GMPPAQ96IJ6 420 aaPredicted RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 COMMD4Q9H0A8 199 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 GLRX2Q9NS18 164 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 TRIM64BA6NI03 449 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 AHRRA9YTQ3 701 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF254O75437 659 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 HSD11B1P28845 292 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 MRPS34P82930 218 aaKnown RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ALKBH1Q13686 389 aaKnown RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 KRTCAP3Q53RY4 240 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 CISD2Q8N5K1 135 aaKnown RBP15.29■□□□□ 0.04
CLDN4-201ENST00000340958 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 OR5AK2Q8NH90 309 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 ABHD4Q8TB40 342 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 HSD17B8Q92506 261 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 FOXB1Q99853 325 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 LINC00470Q9BZP3 86 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 SIAEQ9HAT2 523 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 GP6Q9HCN6 339 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 LHFPL6Q9Y693 200 aa15.29■□□□□ 0.04
CLDN4-201ENST00000340958 RER1O15258 196 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 TPOP07202 933 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 B4GALT1P15291 398 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 SOX6P35712 828 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 NANOS3P60323 173 aaKnown RBP15.28■□□□□ 0.04
CLDN4-201ENST00000340958 DCTN2Q13561 401 aaKnown RBP15.28■□□□□ 0.04
CLDN4-201ENST00000340958 ODF4Q2M2E3 257 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 DEGS2Q6QHC5 323 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 CFAP77Q6ZQR2 320 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 NUFIP2Q7Z417 695 aaKnown RBP15.28■□□□□ 0.04
CLDN4-201ENST00000340958 CEACAM19Q7Z692 300 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF676Q8N7Q3 588 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 RNF133Q8WVZ7 376 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 MAP6Q96JE9 813 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 PGLYRP3Q96LB9 341 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 SLC7A10Q9NS82 523 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF462Q96JM2 2506 aa15.28■□□□□ 0.04
CLDN4-201ENST00000340958 FARS2O95363 451 aaKnown RBP15.27■□□□□ 0.04
CLDN4-201ENST00000340958 WNT11O96014 354 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 AGTR1P30556 359 aa15.27■□□□□ 0.04
CLDN4-201ENST00000340958 INSL4Q14641 139 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms