RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 C16orf52Q8NHV5 167 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
RIOK3-201ENST00000339486 NUDT22Q9BRQ3 303 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 WIF1Q9Y5W5 379 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 PUS1Q9Y606 427 aaKnown RBP eCLIP11.3□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM218A2RU14 115 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 AKR7A3O95154 331 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 EFNB2P52799 333 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 GPR85P60893 370 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 HERV-K104P61576 105 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 BTG2P78543 158 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 PPP1R1AQ13522 171 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 ACKR1Q16570 336 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 IAH1Q2TAA2 248 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-201ENST00000339486 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 B3GALT1Q9Y5Z6 326 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 PIN1P1O15428 100 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM127O75204 238 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 EGR3Q06889 387 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 DEFB119Q8N690 84 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM229BQ8NBD8 167 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 LMX1AQ8TE12 382 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 C4orf45Q96LM5 186 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM59Q9BXS4 323 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
RIOK3-201ENST00000339486 HIF3AQ9Y2N7 669 aa11.3□□□□□ -0.6
RIOK3-201ENST00000339486 TRAV20A0A0B4J274 112 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 C4orf51C9J302 202 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 OIP5O43482 229 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 NKX2-2O95096 273 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CASRP41180 1078 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 GLP1RP43220 463 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 OR1D4P47884 311 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CAV2P51636 162 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 AGBL4Q5VU57 503 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 NAA40Q86UY6 237 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 SULF2Q8IWU5 870 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 WDSUB1Q8N9V3 476 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 ZPLD1Q8TCW7 415 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 LPAR4Q99677 370 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 BANF2Q9H503 90 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CABIN1Q9Y6J0 2220 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 PTP4A3O75365 173 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 TBX6O95947 436 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 SLC2A1P11166 492 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF93P35789 620 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 OR2B8PP59922 312 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 SNRPEP62304 92 aaKnown RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 C1orf189Q5VU69 101 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CA13Q8N1Q1 262 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 SLC22A24Q8N4F4 322 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM225BP0DP42 221 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 GNB3P16520 340 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 OR5M8Q8NGP6 311 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 ASB13Q8WXK3 278 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 KISS1RQ969F8 398 aaPredicted RBP11.29□□□□□ -0.6
RIOK3-201ENST00000339486 SLAMF9Q96A28 289 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 KLHDC7BQ96G42 594 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 PARPBPQ9NWS1 579 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
RIOK3-201ENST00000339486 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 E9PQ18 207 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF749O43361 778 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 S100GP29377 79 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF425Q6IV72 752 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF485Q8NCK3 441 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 HOXB13Q92826 284 aaPredicted RBP11.28□□□□□ -0.6
RIOK3-201ENST00000339486 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 MRPS28Q9Y2Q9 187 aaKnown RBP11.28□□□□□ -0.6
RIOK3-201ENST00000339486 VSTM2BA6NLU5 285 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
RIOK3-201ENST00000339486 HSPA12AO43301 675 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 HCRTR1O43613 425 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ICAM2P13598 275 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ZNF41P51814 821 aaPredicted RBP11.28□□□□□ -0.6
RIOK3-201ENST00000339486 PPP2CBP62714 309 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 PPP2CAP67775 309 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 SHISA6Q6ZSJ9 500 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 LINC00518Q8N0U6 118 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 OR1S1Q8NH92 325 aa11.28□□□□□ -0.6
RIOK3-201ENST00000339486 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms