RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SCG5P05408 212 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 HTR5AP47898 357 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 SLC7A2P52569 658 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 LCN2P80188 198 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 TNFAIP6P98066 277 aaPredicted RBP16.49■□□□□ 0.23
ITGA4-202ENST00000339307 ANKDD1AQ495B1 522 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 C1orf94Q6P1W5 598 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 MBOAT2Q6ZWT7 520 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 TREML1Q86YW5 311 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 RNF113BQ8IZP6 322 aaKnown RBP16.49■□□□□ 0.23
ITGA4-202ENST00000339307 ST7LQ8TDW4 575 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 HSH2DQ96JZ2 352 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 Q96M85 177 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 ZNF570Q96NI8 536 aa16.49■□□□□ 0.23
ITGA4-202ENST00000339307 DEAF1O75398 565 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-202ENST00000339307 COX4I1P13073 169 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 GSTM3P21266 225 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 SCRN3Q0VDG4 424 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 HNRNPA0Q13151 305 aaKnown RBP16.48■□□□□ 0.23
ITGA4-202ENST00000339307 ZBED5Q49AG3 693 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 MTX3Q5HYI7 312 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 OTPQ5XKR4 325 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 C1orf229Q6ZS94 237 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-202ENST00000339307 ZER1Q7Z7L7 766 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 CMTM5Q96DZ9 223 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 DIRC2Q96SL1 478 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 TMPRSS13Q9BYE2 586 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 C7orf69Q9H7B7 122 aa16.48■□□□□ 0.23
ITGA4-202ENST00000339307 CGGBP1Q9UFW8 167 aaPredicted RBP16.48■□□□□ 0.23
ITGA4-202ENST00000339307 NDUFAB1O14561 156 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 CDC42EP2O14613 210 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 SGCEO43556 437 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 UBOX5O94941 541 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 CD14P08571 375 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 SBK2P0C263 348 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 NCK1P16333 377 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 TNFSF4P23510 183 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 PRDX6P30041 224 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 PSG7Q13046 419 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 FHL1Q13642 323 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 SPRNQ5BIV9 151 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 FOXL2NBQ6ZUU3 175 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 CBLL1Q75N03 491 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 SYT9Q86SS6 491 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 SEMA6DQ8NFY4 1073 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 OR2Z1Q8NG97 314 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 NANPQ8TBE9 248 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 BCAS4Q8TDM0 211 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 FAM46AQ96IP4 442 aaKnown RBP16.47■□□□□ 0.23
ITGA4-202ENST00000339307 HOPXQ9BPY8 73 aaPredicted RBP16.47■□□□□ 0.23
ITGA4-202ENST00000339307 PLEK2Q9NYT0 353 aa16.47■□□□□ 0.23
ITGA4-202ENST00000339307 FAM32AQ9Y421 112 aaKnown RBP16.47■□□□□ 0.23
ITGA4-202ENST00000339307 TRIM77I1YAP6 450 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 J3QLI3 93 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 NME4O00746 187 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 CENPAP49450 140 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 MESTQ5EB52 335 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 FGD3Q5JSP0 725 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 BPIFB2Q8N4F0 458 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 NPEPL1Q8NDH3 523 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 GCDHQ92947 438 aaPredicted RBP16.46■□□□□ 0.23
ITGA4-202ENST00000339307 CMBLQ96DG6 245 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 KCTD14Q9BQ13 255 aaPredicted RBP16.46■□□□□ 0.23
ITGA4-202ENST00000339307 EFCAB1Q9HAE3 211 aa16.46■□□□□ 0.23
ITGA4-202ENST00000339307 NMNAT1Q9HAN9 279 aaPredicted RBP16.46■□□□□ 0.23
ITGA4-202ENST00000339307 TEX13CA0A0J9YWL9 993 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 PRSS37A4D1T9 235 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 H3BSA7 217 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SLC16A7O60669 478 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 RBMXP38159 391 aaKnown RBP16.45■□□□□ 0.22
ITGA4-202ENST00000339307 GSK3BP49841 420 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 NUDT2P50583 147 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 TMPRSS11FQ6ZWK6 438 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 C1QL2Q7Z5L3 287 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.45■□□□□ 0.22
ITGA4-202ENST00000339307 ZFAND2BQ8WV99 257 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 C22orf15Q8WYQ4 148 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 RASD2Q96D21 266 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 JMJD8Q96S16 334 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 POFUT1Q9H488 388 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 DCAF16Q9NXF7 216 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 IL20RAQ9UHF4 553 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 KLHL21Q9UJP4 597 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 TMEM5Q9Y2B1 443 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 NPTNQ9Y639 398 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SOCS2O14508 198 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 CTLA4P16410 223 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 CFPP27918 469 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 KRR1Q13601 381 aaKnown RBP16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SLC7A6Q92536 515 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SLC6A7Q99884 636 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SUCNR1Q9BXA5 334 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 SYT4Q9H2B2 425 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 TBCCD1Q9NVR7 557 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 ASH2LQ9UBL3 628 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 EGFL7Q9UHF1 273 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 PURGQ9UJV8 347 aaKnown RBP16.45■□□□□ 0.22
ITGA4-202ENST00000339307 RPS6KA6Q9UK32 745 aa16.45■□□□□ 0.22
ITGA4-202ENST00000339307 COA3Q9Y2R0 106 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms