RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 OR4E1P0C645 316 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 RFC3P40938 356 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 NSDHLQ15738 373 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CD226Q15762 336 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 GLT8D1Q68CQ7 371 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 BOLLQ8N9W6 283 aaKnown RBP16.9■□□□□ 0.3
PSPC1-201ENST00000338910 OR1S2Q8NGQ3 325 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CCDC74AQ96AQ1 378 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 Q96M85 177 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 GAL3ST4Q96RP7 486 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 NMNAT2Q9BZQ4 307 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 MMACHCQ9Y4U1 282 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 TRAV8-7A0A075B6U6 113 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 A0A1B0GTI1 187 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 SLC25A12O75746 678 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ANXA2P07355 339 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 PVALBP20472 110 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 PPICP45877 212 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 CCR4P51679 360 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 EFNB2P52799 333 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 BIKQ13323 160 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 SNTB1Q13884 538 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 SLC6A19Q695T7 634 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 CBLN2Q8IUK8 224 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ARMC10Q8N2F6 343 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 PHOSPHO1Q8TCT1 267 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 CCDC107Q8WV48 283 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 MVB12AQ96EY5 273 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 UBQLN4Q9NRR5 601 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 FGF21Q9NSA1 209 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 STEAP1Q9UHE8 339 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 PILRBQ9UKJ0 227 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 CFAP54Q96N23 3096 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 IGKV3D-11A0A0A0MRZ8 115 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 MEIS3P1A6NDR6 274 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 OIP5O43482 229 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 RPP14O95059 124 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 TDGF1P13385 188 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 FBLP22087 321 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 EPHA8P29322 1005 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 BDKRB2P30411 391 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 FOXL2P58012 376 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 DCDP81605 110 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 SRSF4Q08170 494 aaKnown RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 DHRS7BQ6IAN0 325 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 STEAP1BQ6NZ63 245 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 CBLN3Q6UW01 205 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF227Q86WZ6 799 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 STEAP2Q8NFT2 490 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 OR5AK2Q8NH90 309 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 EDAQ92838 391 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 DVL3Q92997 716 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 SLC41A2Q96JW4 573 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ADOQ96SZ5 270 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF471Q9BX82 626 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 MKKSQ9NPJ1 570 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 FRRS1LQ9P0K9 344 aa16.89■□□□□ 0.29
PSPC1-201ENST00000338910 ATXN7L1Q9ULK2 861 aaPredicted RBP16.89■□□□□ 0.29
PSPC1-201ENST00000338910 A0A087WUJ7 227 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 CPED1A4D0V7 1026 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 H0YC42 278 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 UPK3AO75631 287 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 DDAH2O95865 285 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 MAS1P04201 325 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 SLC25A4P12235 298 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 ALKBH1Q13686 389 aaKnown RBP16.88■□□□□ 0.29
PSPC1-201ENST00000338910 GXYLT1Q4G148 440 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 SHISA6Q6ZSJ9 500 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 TMPRSS9Q7Z410 1059 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 BIVMQ86UB2 503 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 CARFQ8N187 725 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 OR1M1Q8NGA1 313 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 OR5M8Q8NGP6 311 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 ZNF721Q8TF20 911 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 SLC46A1Q96NT5 459 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 VRK1Q99986 396 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-201ENST00000338910 ADAT1Q9BUB4 502 aaKnown RBP16.88■□□□□ 0.29
PSPC1-201ENST00000338910 ASCC3Q8N3C0 2202 aaKnown RBP16.88■□□□□ 0.29
PSPC1-201ENST00000338910 TECTAO75443 2155 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 RNF222A6NCQ9 220 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 GMFGO60234 142 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 OR8G3PP0DMU2 310 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 GPR143P51810 404 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 LINC01590Q5TEZ4 76 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 ARHGAP40Q5TG30 622 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 C11orf87Q6NUJ2 197 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 WDR74Q6RFH5 385 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-201ENST00000338910 WDR5BQ86VZ2 330 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 OR8S1Q8NH09 359 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 C3orf49Q96BT1 292 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 NUDT9Q9BW91 350 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 MKL2Q9ULH7 1088 aa16.88■□□□□ 0.29
PSPC1-201ENST00000338910 TMEM82A0PJX8 343 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 UTS2O95399 124 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 IGKV3-11P04433 115 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 HLA-BQ31612 363 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 GUSBP11Q6P575 273 aa16.87■□□□□ 0.29
PSPC1-201ENST00000338910 PRMT8Q9NR22 394 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms