RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CNTNAP1P78357 1384 aa1.34□□□□□ -2.19
XRCC4-202ENST00000338635 AKNAQ7Z591 1439 aa1.34□□□□□ -2.19
XRCC4-202ENST00000338635 UBN2Q6ZU65 1347 aa1.34□□□□□ -2.19
XRCC4-202ENST00000338635 ANKRD30BQ9BXX2 1392 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TSPAN11A1L157 253 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TRPC5OSA6NMA1 111 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PRMT5O14744 637 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 EMC8O43402 210 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 GMDSO60547 372 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 MPDU1O75352 247 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ENTPD5O75356 428 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CLDN11O75508 207 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CRTAPO75718 401 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 EIF3GO75821 320 aaKnown RBP eCLIP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CBR3O75828 277 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PLEKHA8P1O95397 391 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 FADS2O95864 444 aaKnown RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CST4P01036 141 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 IGHV3-23P01764 117 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 RPN2P04844 631 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PSG2P11465 335 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CTRB1P17538 263 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PSMC3P17980 439 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 FUT3P21217 361 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ATP6V1B2P21281 511 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 IVDP26440 423 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 HTR2CP28335 458 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 OR1E1P30953 314 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PCK1P35558 622 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ARR3P36575 388 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CRATP43155 626 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 P2RY4P51582 365 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ATP6V0D1P61421 351 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ACTA2P62736 377 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 SKP1P63208 163 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ACTG2P63267 376 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ACTC1P68032 377 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ACTA1P68133 377 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 SP4Q02446 784 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ECH1Q13011 328 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 STX3Q13277 289 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ART3Q13508 389 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 MAPRE2Q15555 327 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 GABRA6Q16445 453 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 IL17AQ16552 155 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 NRF1Q16656 503 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 VAX1Q5SQQ9 334 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF470Q6ECI4 717 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CTRB2Q6GPI1 263 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 C11orf71Q6IPW1 123 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 WDR74Q6RFH5 385 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TFAP2EQ6VUC0 442 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 IL34Q6ZMJ4 242 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 MBOAT1Q6ZNC8 495 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 OR2W3Q7Z3T1 314 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF571Q7Z3V5 609 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PEX26Q7Z412 305 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TMEM150AQ86TG1 271 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF546Q86UE3 836 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 LHFPL3Q86UP9 236 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PIANPQ8IYJ0 282 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 RDH10Q8IZV5 341 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PUSL1Q8N0Z8 303 aaKnown RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 C14orf178Q8N769 122 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF433Q8N7K0 673 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PRELID2Q8N945 189 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CCDC71LQ8N9Z2 235 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ZNF740Q8NDX6 193 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 OR6N2Q8NGY6 317 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 NUBPLQ8TB37 319 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ITFG1Q8TB96 612 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TMEM239Q8WW34 195 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CDKL2Q92772 493 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 IL22RA2Q969J5 263 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 FGGYQ96C11 551 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 LRRC45Q96CN5 670 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ITCHQ96J02 903 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 OR5B12Q96R08 314 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 HIST1H4GQ99525 98 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PELOQ9BRX2 385 aaKnown RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 NAT9Q9BTE0 207 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 MED10Q9BTT4 135 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 BBS2Q9BXC9 721 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 SLC25A39Q9BZJ4 359 aaPredicted RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 HDHD2Q9H0R4 259 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CWH43Q9H720 699 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 EML4Q9HC35 981 aaKnown RBP1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CD209Q9NNX6 404 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PRSS16Q9NQE7 514 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 AGPAT4Q9NRZ5 378 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 CLN6Q9NWW5 311 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 TREM2Q9NZC2 230 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 GNPTGQ9UJJ9 305 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 ATP6V1DQ9Y5K8 247 aa1.34□□□□□ -2.2
XRCC4-202ENST00000338635 PHF3Q92576 2039 aaKnown RBP1.33□□□□□ -2.2
XRCC4-202ENST00000338635 IGLV3-22A0A075B6J6 115 aa1.33□□□□□ -2.2
XRCC4-202ENST00000338635 IGKV2-28A0A075B6P5 120 aa1.33□□□□□ -2.2
XRCC4-202ENST00000338635 IGKV2D-24A0A075B6R9 120 aa1.33□□□□□ -2.2
XRCC4-202ENST00000338635 IGHV1OR15-1A0A075B7D0 117 aa1.33□□□□□ -2.2
XRCC4-202ENST00000338635 IGHV3OR16-13A0A075B7E8 117 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms