RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF385AQ96PM9 386 aaKnown RBP14.41□□□□□ -0.1
HPS1-202ENST00000338546 COL25A1Q9BXS0 654 aaPredicted RBP14.41□□□□□ -0.1
HPS1-202ENST00000338546 ACKR4Q9NPB9 350 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 G6PC2Q9NQR9 355 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 GDF2Q9UK05 429 aaPredicted RBP14.41□□□□□ -0.1
HPS1-202ENST00000338546 SPATA2Q9UM82 520 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 FLVCR1Q9Y5Y0 555 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 LHFPL6Q9Y693 200 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 V9GY05 133 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 CNTRLQ7Z7A1 2325 aa14.41□□□□□ -0.1
HPS1-202ENST00000338546 MED13Q9UHV7 2174 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 IGHV3-15A0A0B4J1V0 119 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 A0A1B0GTH9 108 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 IFITM5A6NNB3 132 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 ZNF878C9JN71 531 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 DHHO43323 396 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 CXCL13O43927 109 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 CD2P06729 351 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 UBCP0CG48 685 aaKnown RBP14.4□□□□□ -0.1
HPS1-202ENST00000338546 ATF1P18846 271 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 MSR1P21757 451 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 EIF1AXP47813 144 aaKnown RBP14.4□□□□□ -0.1
HPS1-202ENST00000338546 LHX2P50458 406 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 ZNF84P51523 738 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 CLDN15P56746 228 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 SLC25A35Q3KQZ1 300 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 SLC22A16Q86VW1 577 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 MEIOBQ8N635 442 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 TMEM251Q8N6I4 163 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 POC5Q8NA72 575 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 TRMT10AQ8TBZ6 339 aaKnown RBP14.4□□□□□ -0.1
HPS1-202ENST00000338546 TMEM106AQ96A25 262 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 TMEM45BQ96B21 275 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 NELFAQ9H3P2 528 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 ZNF552Q9H707 407 aaPredicted RBP14.4□□□□□ -0.1
HPS1-202ENST00000338546 OR52A1Q9UKL2 312 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 POLR1DQ9Y2S0 133 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 AK6Q9Y3D8 172 aaKnown RBP14.4□□□□□ -0.1
HPS1-202ENST00000338546 CACNA1CQ13936 2221 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 MED12Q93074 2177 aa14.4□□□□□ -0.1
HPS1-202ENST00000338546 TMEM269A0A1B0GVZ9 245 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FAM25AB3EWG3 89 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FAM25CB3EWG5 89 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FAM25GB3EWG6 89 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 SLC43A1O75387 559 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 ACTL6AO96019 429 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 CALCBP10092 127 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 IL7P13232 177 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 ZNF708P17019 499 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 ELK1P19419 428 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 MEOX1P50221 254 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 PLGLB1Q02325 96 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 RIPPLY2Q5TAB7 128 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 IGFL2Q6UWQ7 119 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 BAIAP2L2Q6UXY1 529 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 GALNTL5Q7Z4T8 443 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 LRRTM1Q86UE6 522 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 SAMD12Q8N8I0 201 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 KCNJ15Q99712 375 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 B3GAT2Q9NPZ5 323 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 CENPMQ9NSP4 180 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 HHLA2Q9UM44 414 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FOXJ3Q9UPW0 622 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 EMC9Q9Y3B6 208 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 IGKV3D-15A0A087WSY6 115 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 H0YC42 278 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 HLA-DQB1P01920 261 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 CTSSP25774 331 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 NR4A2P43354 598 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 STARP49675 285 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 CLDN18P56856 261 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
HPS1-202ENST00000338546 ARG2P78540 354 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 MFGE8Q08431 387 aaPredicted RBP14.39□□□□□ -0.11
HPS1-202ENST00000338546 CAMK2BQ13554 666 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 PYDC2Q56P42 97 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 ATP1A1-AS1Q5TC04 95 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 OTPQ5XKR4 325 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 SPATC1Q76KD6 591 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FCRLAQ7L513 359 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FAM109AQ8N4B1 249 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 TSEN15Q8WW01 171 aaKnown RBP14.39□□□□□ -0.11
HPS1-202ENST00000338546 HES7Q9BYE0 225 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 RNF122Q9H9V4 155 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 FAM206AQ9NX38 181 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 EXTL2Q9UBQ6 330 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 DHDHQ9UQ10 334 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 SLC22A13Q9Y226 551 aa14.39□□□□□ -0.11
HPS1-202ENST00000338546 ZNF891A8MT65 544 aaPredicted RBP14.38□□□□□ -0.11
HPS1-202ENST00000338546 ACOT7O00154 380 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 NKX2-8O15522 239 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 TPPPO94811 219 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 WNT11O96014 354 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 SLC2A2P11168 524 aaPredicted RBP14.38□□□□□ -0.11
HPS1-202ENST00000338546 FSTP19883 344 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 SOX2P48431 317 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 SELENOPP49908 381 aa14.38□□□□□ -0.11
HPS1-202ENST00000338546 PSMA6P60900 246 aaKnown RBP14.38□□□□□ -0.11
HPS1-202ENST00000338546 MRPS34P82930 218 aaKnown RBP14.38□□□□□ -0.11
HPS1-202ENST00000338546 IL18Q14116 193 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms