RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 REV1Q9UBZ9 1251 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 DUSP13Q9UII6 198 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 B9D1Q9UPM9 204 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 POMPQ9Y244 141 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 NBEAL1Q6ZS30 2694 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 TCRBV3S1A0A5B6 114 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 DHRS12A0PJE2 317 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 M0R233 179 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 IDH3BO43837 385 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 NGFP01138 241 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 LCKP06239 509 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 CSF3P09919 207 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 CCNOP22674 350 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 RAD52P43351 418 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 GDI2P50395 445 aaKnown RBP13.07□□□□□ -0.32
PRKN-201ENST00000338468 PDLIM4P50479 330 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
PRKN-201ENST00000338468 MEP1BQ16820 701 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 SLC35F1Q5T1Q4 408 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 RASSF6Q6ZTQ3 369 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 RFPL4BQ6ZWI9 263 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
PRKN-201ENST00000338468 TMEM179BQ7Z7N9 219 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 ZBTB46Q86UZ6 589 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 NEU4Q8WWR8 484 aaPredicted RBP13.07□□□□□ -0.32
PRKN-201ENST00000338468 SLCO4A1Q96BD0 722 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 BCL2L14Q9BZR8 327 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 FN3KQ9H479 309 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 SRA1Q9HD15 236 aaKnown RBP13.07□□□□□ -0.32
PRKN-201ENST00000338468 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
PRKN-201ENST00000338468 ABCA1O95477 2261 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 CST1P01037 141 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 SLC25A16P16260 332 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 CRABP1P29762 137 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 HIST1H3AP68431 136 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 LOXL1Q08397 574 aaPredicted RBP13.06□□□□□ -0.32
PRKN-201ENST00000338468 SCRN3Q0VDG4 424 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 AQP6Q13520 282 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 FLOT2Q14254 428 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
PRKN-201ENST00000338468 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 HIST2H3AQ71DI3 136 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 JAZF1Q86VZ6 243 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 ALDH16A1Q8IZ83 802 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 SLC26A10Q8NG04 563 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 OR1J1Q8NGS3 322 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 OR4Q3Q8NH05 313 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 SYNPRQ8TBG9 265 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
PRKN-201ENST00000338468 NIPSNAP1Q9BPW8 284 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 RACGAP1Q9H0H5 632 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 RPRD1BQ9NQG5 326 aaKnown RBP13.06□□□□□ -0.32
PRKN-201ENST00000338468 LHFPL6Q9Y693 200 aa13.06□□□□□ -0.32
PRKN-201ENST00000338468 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
PRKN-201ENST00000338468 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 OR6C6A6NF89 314 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 NDUFS8O00217 210 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 SGCEO43556 437 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 DOK2O60496 412 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 SOX14O95416 240 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 STAMBPO95630 424 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 RENP00797 406 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 IFNA2P01563 188 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 TFP02787 698 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 COX5BP10606 129 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 NAT2P11245 290 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 DAOP14920 347 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 NOS3P29474 1203 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 MPV17P39210 176 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 ERFP50548 548 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 KLF3P57682 345 aaPredicted RBP13.05□□□□□ -0.32
PRKN-201ENST00000338468 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRKN-201ENST00000338468 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 ELFN2Q5R3F8 820 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 SPATA46Q5T0L3 261 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 RPL13AP3Q6NVV1 102 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 CD300LDQ6UXZ3 194 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 LNX2Q8N448 690 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 CYB561A3Q8NBI2 242 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 PAPD5Q8NDF8 572 aaKnown RBP13.05□□□□□ -0.32
PRKN-201ENST00000338468 ICA1LQ8NDH6 482 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 OR10G2Q8NGC3 310 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 SLC25A40Q8TBP6 338 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 ZNRF4Q8WWF5 429 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 SLC7A6Q92536 515 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 GTF3AQ92664 365 aaKnown RBP13.05□□□□□ -0.32
PRKN-201ENST00000338468 MS4A5Q9H3V2 200 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 MYOZ1Q9NP98 299 aaPredicted RBP13.05□□□□□ -0.32
PRKN-201ENST00000338468 ARMC1Q9NVT9 282 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 TAAR3PQ9P1P4 343 aa13.05□□□□□ -0.32
PRKN-201ENST00000338468 A0A1W2PPW3 197 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 ARRDC5A6NEK1 342 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 LYNX1G3V0Z9 82 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 RER1O15258 196 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 NCR1O76036 304 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
PRKN-201ENST00000338468 HPXP02790 462 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms