RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LRP12Q9Y561 859 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TRBV2A0A0J9YWF9 115 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NPR2P20594 1047 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TGM4P49221 684 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TDGF1P3P51864 188 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NANOS3P60323 173 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FABP5Q01469 135 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ENDOGQ14249 297 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 UBE2J2Q8N2K1 259 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KDF1Q8NAX2 398 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FOXB1Q99853 325 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HDHD5Q9BXW7 423 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PRSS50Q9UI38 385 aa12.98□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF587BE7ETH6 402 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RER1O15258 196 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 B4GALT1P15291 398 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF182P17025 639 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GDI2P50395 445 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RIDAP52758 137 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 C9orf135Q5VTT2 229 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NSUN5P2Q63ZY6 315 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CD163Q86VB7 1156 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR10S1Q8NGN2 331 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GHSRQ92847 366 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SMIM19Q96E16 107 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SIAEQ9HAT2 523 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ASF1BQ9NVP2 202 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 H2BFMP0C1H6 154 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GABRA1P14867 456 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ABOP16442 354 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FAPQ12884 760 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ALKBH1Q13686 389 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 INSL4Q14641 139 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SF3B4Q15427 424 aaKnown RBP eCLIP12.97□□□□□ -0.332e-8■■■■□ 19.3
CDK5RAP3-201ENST00000338399 HSPB2Q16082 182 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HAVCR2Q8TDQ0 301 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PDCD1LG2Q9BQ51 273 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLC25A18Q9H1K4 315 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TXNL4BQ9NX01 149 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FBXL3Q9UKT7 428 aa12.97□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CD8B2A6NJW9 211 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RPL36A-HNRNPH2H7BZ11 118 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GABRPO00591 440 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 WDR1O75083 606 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF254O75437 659 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CD8BP10966 210 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CD53P19397 219 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OPRL1P41146 370 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ARF1P84077 181 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 C22orf42Q6IC83 251 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RTL6Q6ICC9 239 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CD200R1LQ6Q8B3 271 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DEGS2Q6QHC5 323 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF813Q6ZN06 617 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLC22A24Q8N4F4 322 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR2G2Q8NGZ5 317 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FAM57AQ8TBR7 257 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FBXO17Q96EF6 278 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLX1AQ9BQ83 275 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 FRRS1LQ9P0K9 344 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZGRF1Q86YA3 2104 aa12.96□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF878C9JN71 531 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PNPP00491 289 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PEX19P40855 299 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR3A2P47893 321 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SERPINB10P48595 397 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KLRB1Q12918 225 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR2A2Q6IF42 318 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 USP43Q70EL4 1123 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CNEP1R1Q8N9A8 125 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GJC3Q8NFK1 279 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR13C5Q8NGS8 318 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ABHD4Q8TB40 342 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RPS4Y2Q8TD47 263 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MBD3L4A6NDZ8 208 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms