RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PHYHIPQ92561 330 aa20.58■□□□□ 0.89
CLPTM1-201ENST00000337392 SLC25A44Q96H78 314 aaPredicted RBP20.58■□□□□ 0.89
CLPTM1-201ENST00000337392 MFRPQ9BY79 579 aa20.58■□□□□ 0.89
CLPTM1-201ENST00000337392 DPAGT1Q9H3H5 408 aa20.58■□□□□ 0.89
CLPTM1-201ENST00000337392 SDHAF3Q9NRP4 125 aa20.58■□□□□ 0.89
CLPTM1-201ENST00000337392 KHDRBS3O75525 346 aaKnown RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 PITPNAQ00169 270 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 OR4D10Q8NGI6 311 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 OR10A4Q9H209 315 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 TRAF3IP2O43734 574 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 SRSF10O75494 262 aaKnown RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 ONECUT2O95948 504 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 NAGAP17050 411 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 PRKXP51817 358 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 PEAR1Q5VY43 1037 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 RAET1LQ5VY80 246 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 NHLRC1Q6VVB1 395 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 TIPARPQ7Z3E1 657 aaKnown RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 UEVLDQ8IX04 471 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 HAVCR1Q96D42 359 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 HRASLSQ9HDD0 168 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 MRPS18BQ9Y676 258 aaKnown RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 NCKAP5O14513 1909 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 DNASE1L1P49184 302 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 SUMO3P55854 103 aaPredicted RBP20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 CLRN1P58418 232 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 ZP4Q12836 540 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 C2orf76Q3KRA6 126 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 SLC23A3Q6PIS1 610 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 TMEM156Q8N614 296 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 OR1J4Q8NGS1 313 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 OR13C3Q8NGS6 347 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 GIMAP1Q8WWP7 306 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 ASB17Q8WXJ9 295 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 AKAP1Q92667 903 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■□□□□ 10.5
CLPTM1-201ENST00000337392 MIB2Q96AX9 1013 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 SPACA5Q96QH8 159 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 STEAP1Q9UHE8 339 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 OR52A1Q9UKL2 312 aa20.57■□□□□ 0.88
CLPTM1-201ENST00000337392 CNOT1A5YKK6 2376 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 C9J4A7 227 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 PHYHO14832 338 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 HPXP02790 462 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 Q0VFX4 171 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 GFOD2Q3B7J2 385 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 GLYATL3Q5SZD4 288 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 ZC3H10Q96K80 434 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 MNTQ99583 582 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 B3GALT5Q9Y2C3 310 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 MED13Q9UHV7 2174 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 MYO7BQ6PIF6 2116 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 C5orf63A6NC05 138 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 SULT2B1O00204 365 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 RER1O15258 196 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 STK17BO94768 372 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 H2BFMP0C1H6 154 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 CCR9P51686 369 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 MC2RQ01718 297 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 ST3GAL2Q16842 350 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 RTN4RL2Q86UN3 420 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 OR2Y1Q8NGV0 311 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 SLAMF6Q96DU3 332 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 WDR54Q9H977 334 aa20.56■□□□□ 0.88
CLPTM1-201ENST00000337392 LOC102723996A0A087X1L8 192 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 NSG1A0A0A6YYJ2 146 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 VEGFCP49767 419 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 ZNF227Q86WZ6 799 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 JAGN1Q8N5M9 183 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 DVL3Q92997 716 aaPredicted RBP20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 MRPL13Q9BYD1 178 aaKnown RBP20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 ASH2LQ9UBL3 628 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 ZNF222Q9UK12 451 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 POLR1DQ9Y2S0 133 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 R4GMQ9 66 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 PCSK5Q92824 1860 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 A0A1W2PQ72 361 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 A6NIZ1 184 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 RAP1BP61224 184 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 RAP1AP62834 184 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 C5orf46Q6UWT4 87 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 FAM3DQ96BQ1 224 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 GHITMQ9H3K2 345 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 PISDQ9UG56 409 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 LHFPL6Q9Y693 200 aa20.55■□□□□ 0.88
CLPTM1-201ENST00000337392 LNP1A1A4G5 178 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 FAM172BPA6NC97 362 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 LDOC1O95751 146 aaPredicted RBP20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 PGA4P0DJD7 388 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 PGA3P0DJD8 388 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 TCN2P20062 427 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 MPLP40238 635 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 PLXDC2Q6UX71 529 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 PLCZ1Q86YW0 608 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 NKD1Q969G9 470 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 OR2B2Q9GZK3 357 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 TRAV18A0A075B6X5 111 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 ETV2O00321 342 aaPredicted RBP20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 CTAG2O75638 210 aa20.54■□□□□ 0.88
CLPTM1-201ENST00000337392 KRT33AO76009 404 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms