RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PIN4Q9Y237 131 aaKnown RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 HS3ST3B1Q9Y662 390 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 COL11A2P13942 1736 aaPredicted RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 EVPLQ92817 2033 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 LOC100509620A0A075B734 347 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 GEMIN2O14893 280 aaKnown RBP7.81□□□□□ -1.16
TDP1-201ENST00000335725 KLK8O60259 260 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TOX4O94842 621 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SOX14O95416 240 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 DCTDP32321 178 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ARL2P36404 184 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 WNT3AP56704 352 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ERVS71-1P61550 626 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 CBFBQ13951 182 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 RTL6Q6ICC9 239 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TSEN54Q7Z6J9 526 aaKnown RBP7.81□□□□□ -1.16
TDP1-201ENST00000335725 PIM3Q86V86 326 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SCN4BQ8IWT1 228 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 C9orf40Q8IXQ3 194 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 CMTM4Q8IZR5 234 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 MFSD8Q8NHS3 518 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 LYPD6BQ8NI32 183 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 DYRK2Q92630 601 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 CXorf36Q9H7Y0 433 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SLC2A6Q9UGQ3 507 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TSPAN16Q9UKR8 245 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 NOP16Q9Y3C1 178 aaKnown RBP7.81□□□□□ -1.16
TDP1-201ENST00000335725 IGHV2OR16-5A0A0B4J2B6 119 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 A0A1W2PNV4 684 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 FAAHO00519 579 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ARL6IP5O75915 188 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 GBAP04062 536 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TMEM225BP0DP42 221 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 DGKAP23743 735 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SCNN1AP37088 669 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 HTR6P50406 440 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 GAS1P54826 345 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SMIM11AP58511 58 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TAS2R43P59537 309 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 CSRP2Q16527 193 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 C4orf17Q53FE4 359 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 HIKESHIQ53FT3 197 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 DCST1Q5T197 706 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 PET117Q6UWS5 81 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 LFNGQ8NES3 379 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 RGP1Q92546 391 aaPredicted RBP7.81□□□□□ -1.16
TDP1-201ENST00000335725 ZNF649Q9BS31 505 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 MEGF9Q9H1U4 602 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 CYTL1Q9NRR1 136 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 KLHL28Q9NXS3 571 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 IKZF2Q9UKS7 526 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 B4DEV8 164 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ANOS1P23352 680 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 PDLIM4P50479 330 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 RAB11AP62491 216 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ZNF763Q0D2J5 394 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 PMS2P11Q13670 270 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TMEM69Q5SWH9 247 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 PIP5KL1Q5T9C9 394 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 C9orf135Q5VTT2 229 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ZNF765Q7L2R6 523 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 TMED4Q7Z7H5 227 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 ACOT4Q8N9L9 421 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 SLC25A21Q9BQT8 299 aaPredicted RBP7.81□□□□□ -1.16
TDP1-201ENST00000335725 DOCK1Q14185 1865 aa7.81□□□□□ -1.16
TDP1-201ENST00000335725 DOCK5Q9H7D0 1870 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 CORTO00230 105 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 EIF1AYO14602 144 aaKnown RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 XKRYO14609 159 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 LRP3O75074 770 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 NDUFB8O95169 186 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 SYNGR4O95473 234 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 ITGBL1O95965 494 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 IFNW1P05000 195 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 IL2RBP14784 551 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 TNFSF4P23510 183 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 EIF1AXP47813 144 aaKnown RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 GLIPR1P48060 266 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 VAMP3Q15836 100 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 ZNF770Q6IQ21 691 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 ZNF322Q6U7Q0 402 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 FAM151BQ6UXP7 276 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 ESPNLQ6ZVH7 1005 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 C4orf19Q8IY42 314 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 PAQR4Q8N4S7 273 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 ZNF615Q8N8J6 731 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 SLC38A9Q8NBW4 561 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 SLC26A10Q8NG04 563 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 RHBDD1Q8TEB9 315 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 TMEM186Q96B77 213 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 JSRP1Q96MG2 331 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 TBX15Q96SF7 602 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 URGCP-MRPS24S4R325 110 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 ZNF646O15015 1829 aaPredicted RBP7.8□□□□□ -1.16
TDP1-201ENST00000335725 PAPLNO95428 1278 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 OR8U9P0C7N5 309 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 AKAIN1P0CW23 69 aa7.8□□□□□ -1.16
TDP1-201ENST00000335725 CTSAP10619 480 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms