RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 PSG4Q00888 419 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 SCRN3Q0VDG4 424 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 PPA1Q15181 289 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 SSX6Q7RTT6 188 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 DPPA2Q7Z7J5 298 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 MYPOPQ86VE0 399 aaPredicted RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 OR2AJ1Q8NGZ0 328 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 ZNF75AQ96N20 296 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 TBX5Q99593 518 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 USB1Q9BQ65 265 aaKnown RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 WACQ9BTA9 647 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 ABHD6Q9BV23 337 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 TTTY10Q9BZA0 68 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 RNF121Q9H920 327 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 FGF20Q9NP95 211 aaPredicted RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
CMC1-201ENST00000334841 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 FLNCQ14315 2725 aa13.18□□□□□ -0.3
CMC1-201ENST00000334841 HCFC1P51610 2035 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 A0A1W2PQL4 384 aaPredicted RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 SGCEO43556 437 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 TMCC2O75069 709 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 RAB36O95755 333 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 LYNP07948 512 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 CELA3BP08861 270 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 PPP3CBP16298 524 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 IGFBP2P18065 325 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ALOX5APP20292 161 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ARR3P36575 388 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 CSNK2BP67870 215 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ACTC1P68032 377 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ACTA1P68133 377 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 SLC35A2P78381 396 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 MVKQ03426 396 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 RAB35Q15286 201 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 KLHL22Q53GT1 634 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 PABPC1L2AQ5JQF8 200 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ZNF454Q8N9F8 522 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ZNF540Q8NDQ6 660 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 GJC3Q8NFK1 279 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 HSD17B8Q92506 261 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 ZC3HAV1LQ96H79 300 aaKnown RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 MNTQ99583 582 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 MED18Q9BUE0 208 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 C1orf198Q9H425 327 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 LAMP5Q9UJQ1 280 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
CMC1-201ENST00000334841 MYO18BQ8IUG5 2567 aa13.17□□□□□ -0.3
CMC1-201ENST00000334841 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 USP9XQ93008 2570 aaPredicted RBP13.16□□□□□ -0.3
CMC1-201ENST00000334841 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 SYNGR3O43761 229 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 DOK2O60496 412 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 CLDN1O95832 211 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
CMC1-201ENST00000334841 IGKV3-15P01624 115 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 OR2T7P0C7T2 308 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 CBR1P16152 277 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
CMC1-201ENST00000334841 IDH3GP51553 393 aaPredicted RBP13.16□□□□□ -0.3
CMC1-201ENST00000334841 ZNF85Q03923 595 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 RAB39AQ14964 217 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 WFDC8Q8IUA0 241 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
CMC1-201ENST00000334841 OR2T27Q8NH04 317 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 RNF133Q8WVZ7 376 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 MUCL1Q96DR8 90 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 SLAMF6Q96DU3 332 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 SIGLEC11Q96RL6 698 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 ZNF649Q9BS31 505 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 COPS4Q9BT78 406 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 PLEK2Q9NYT0 353 aa13.16□□□□□ -0.3
CMC1-201ENST00000334841 DIMT1Q9UNQ2 313 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms